| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08054 | 1:11,910,663-11,910,941 | - | - | - | - | - | - | Detail |
| C1H1g27403 | 1:12,135,209-12,135,649 | - | - | - | - | - | - | Detail |
| C1H1g10156 | 1:12,272,894-12,275,880 | - | - | CX1g002107 | - | - | - | Detail |
| C1H1g05806 | 1:12,275,832-12,278,591 | + | - | - | - | - | - | Detail |
| C1H1g13768 | 1:12,397,829-12,398,927 | + | C2H1g13415 | CX1g001811 | - | Os01g0527900 | - | Detail |
| C1H1g21970 | 1:12,413,074-12,416,799 | + | C2H1g07465 | CX1g002117 | LOC_Os01g24420 | Os01g0346250 | - | Detail |
| C1H1g27382 | 1:12,449,995-12,454,416 | + | C2H1g25406 | CX1g002994 | LOC_Os01g24470 | Os01g0347000 | - | Detail |
| C1H1g08071 | 1:12,454,905-12,459,336 | - | C2H1g02246 | CX1g000129 | LOC_Os01g24480 | Os01g0347100 | - | Detail |
| C1H1g27053 | 1:12,464,219-12,465,938 | - | C2H1g19331 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C1H1g27449 | 1:12,471,501-12,473,416 | + | C2H1g13817 | CX1g006871 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C1H1g19455 | 1:12,480,165-12,481,331 | - | C2H1g00502 | CX1g004946 | LOC_Os01g24600 | Os01g0347500 | - | Detail |
| C1H1g17773 | 1:12,499,393-12,502,269 | - | - | - | - | - | - | Detail |
| C1H1g19481 | 1:12,503,419-12,504,535 | - | C2H1g29017 | CX1g002830 | LOC_Os01g24570 | Os01g0347600 | - | Detail |
| C1H1g09482 | 1:12,507,644-12,508,819 | + | C2H1g00502 | CX1g001042 | LOC_Os01g24600 | Os01g0347500 | - | Detail |
| C1H1g02190 | 1:12,525,299-12,531,293 | + | C2H1g02997 | CX1g000047 | LOC_Os01g24680 | Os01g0348600 | - | Detail |
| C1H1g22060 | 1:12,533,972-12,535,588 | + | C2H1g13094 | CX1g006528 | LOC_Os01g24690 | Os01g0348700 | - | Detail |
| C1H1g28108 | 1:12,538,033-12,540,129 | - | C2H1g24178 | CX1g002294 | LOC_Os01g25280 | Os01g0348800 | - | Detail |
| C1H1g00208 | 1:12,541,678-12,542,212 | - | C2H1g30396 | CX1g002294 | LOC_Os01g24710 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| C1H1g16274 | 1:12,559,226-12,564,177 | - | C2H1g24096 | CX1g004857 | LOC_Os01g24750 | Os01g0349400 | - | Detail |
| C1H1g27046 | 1:12,577,706-12,580,849 | + | C2H1g13316 | CX1g000662 | LOC_Os01g24780 | Os01g0349800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030763 | 3:26,736,584-26,738,809 | - | C1H3g01922 | C2H3g11307 | LOC_Os03g50090 | Os03g0708600 | - | Detail |
| CX3g025191 | 3:26,740,729-26,744,598 | - | C1H3g14178 | C2H3g20554 | LOC_Os03g50100 | Os03g0708700 | - | Detail |
| CX3g026724 | 3:26,757,762-26,762,541 | + | C1H3g25650 | C2H3g01107 | LOC_Os03g50120 | Os03g0708900 | - | Detail |
| CX3g026549 | 3:26,763,991-26,765,926 | - | C1H3g26419 | C2H3g12581 | - | Os03g0709000 | - | Detail |
| CX3g030849 | 3:26,767,891-26,768,371 | - | C1H3g00554 | C2H3g23367 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| CX3g026447 | 3:26,769,961-26,772,840 | + | C1H3g14274 | C2H3g00333 | LOC_Os03g50150 | Os03g0709200 | - | Detail |
| CX3g027687 | 3:26,774,118-26,775,905 | - | C1H3g00862 | C2H3g17990 | LOC_Os03g50160 | Os03g0709300 | - | Detail |
| CX3g031286 | 3:26,797,749-26,799,248 | + | C1H3g26800 | C2H3g22762 | LOC_Os03g50210 | Os03g0710000 | - | Detail |
| CX3g026541 | 3:26,799,753-26,802,292 | - | C1H3g31046 | C2H3g19621 | LOC_Os03g50220 | - | - | Detail |
| CX3g026477 | 3:26,803,329-26,808,617 | - | C1H3g04126 | C2H3g09223 | LOC_Os03g50230 | Os03g0710100 | OsHOP2 | Detail |
| CX3g028078 | 3:26,811,079-26,813,590 | + | C1H3g05875 | C2H3g20376 | LOC_Os03g50250 | Os03g0710500 | - | Detail |
| CX3g030479 | 3:26,814,110-26,814,403 | - | C1H11g18981 | C2H11g12950 | - | - | - | Detail |
| CX3g028947 | 3:26,816,006-26,816,269 | - | - | - | LOC_Os03g50260 | Os03g0710550 | - | Detail |
| CX3g029323 | 3:26,817,427-26,818,706 | - | C1H3g17966 | C2H3g06541 | LOC_Os03g50270 | Os03g0710600 | - | Detail |
| CX3g027946 | 3:26,821,234-26,823,650 | - | C1H3g12018 | C2H3g00310 | LOC_Os03g50280 | Os03g0710700 | - | Detail |
| CX3g029821 | 3:26,831,727-26,833,792 | + | C1H3g30860 | C2H3g13816 | LOC_Os03g50290 | Os03g0710800 | GF14f, SR14-3-3 | Detail |
| CX3g027568 | 3:26,835,286-26,835,780 | - | C1H8g13263 | - | LOC_Os11g39380 | - | - | Detail |
| CX3g029660 | 3:26,838,109-26,845,624 | + | C1H3g01378 | C2H3g13830 | LOC_Os03g50300 | Os03g0710900 | - | Detail |
| CX3g028553 | 3:26,852,029-26,853,647 | + | C1H3g31233 | C2H3g07676 | LOC_Os03g50310 | Os03g0711100 | OsCOL10, OsBBX10, OsJ, OsCCT14 | Detail |
| CX3g031158 | 3:26,855,032-26,869,877 | - | C1H3g26509 | C2H3g02097 | LOC_Os03g50320 | Os03g0711200 | - | Detail |