| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g24113 | 6:27,085,301-27,090,904 | + | C1H6g02408 | CX6g045891 | LOC_Os06g51190 | Os06g0727700 | - | Detail |
| C2H6g26001 | 6:27,096,570-27,099,131 | + | C1H6g24428 | CX6g043291 | LOC_Os06g51200 | Os06g0727800 | - | Detail |
| C2H6g25632 | 6:27,105,009-27,106,901 | + | C1H6g17703 | CX6g043902 | LOC_Os06g51220 | Os06g0728000 | - | Detail |
| C2H6g15055 | 6:27,114,297-27,117,253 | + | C1H6g26909 | CX6g043573 | LOC_Os06g51230 | Os06g0728200 | - | Detail |
| C2H6g26917 | 6:27,125,183-27,133,287 | + | C1H6g18597 | CX6g042569 | LOC_Os06g51250 | Os06g0728600 | - | Detail |
| C2H6g16385 | 6:27,137,544-27,139,934 | - | C1H6g12115 | CX6g043553 | LOC_Os06g51260 | Os06g0728700 | - | Detail |
| C2H6g07555 | 6:27,144,950-27,160,407 | - | C1H6g02583 | CX6g042563 | LOC_Os06g51270 | Os06g0728902 | - | Detail |
| C2H6g08886 | 6:27,164,091-27,167,806 | - | C1H6g03154 | CX6g044653 | LOC_Os06g51290 | Os06g0729000 | - | Detail |
| C2H6g18155 | 6:27,177,294-27,184,959 | + | C1H6g12230 | CX6g041431 | LOC_Os06g51310 | Os06g0729300 | - | Detail |
| C2H6g07406 | 6:27,188,134-27,188,702 | + | C1H6g03228 | CX6g041257 | LOC_Os06g51320 | Os06g0729400 | - | Detail |
| C2H6g30594 | 6:27,188,902-27,194,829 | - | C1H6g31435 | CX6g041559 | LOC_Os06g51330 | Os06g0729500 | - | Detail |
| C2H6g26293 | 6:27,195,429-27,198,351 | - | C1H6g17891 | CX6g042348 | - | Os06g0729650 | - | Detail |
| C2H6g25974 | 6:27,199,318-27,200,580 | + | C1H6g03014 | CX6g044179 | LOC_Os06g51350 | - | - | Detail |
| C2H6g29787 | 6:27,203,797-27,205,681 | + | C1H6g18584 | CX6g041348 | LOC_Os06g51360 | Os06g0729900 | - | Detail |
| C2H6g16952 | 6:27,207,307-27,208,983 | + | C1H6g27052 | CX6g042493 | LOC_Os06g51370 | Os06g0730000 | - | Detail |
| C2H6g17728 | 6:27,214,430-27,217,197 | + | C1H6g12259 | CX6g044778 | LOC_Os06g51380 | Os06g0730200 | - | Detail |
| C2H6g04497 | 6:27,217,098-27,218,218 | - | - | - | - | - | - | Detail |
| C2H6g01087 | 6:27,221,535-27,223,379 | + | C1H6g13387 | CX6g041601 | LOC_Os06g51390 | Os06g0730300 | - | Detail |
| C2H6g17437 | 6:27,227,157-27,228,071 | + | C1H6g31546 | CX6g041947 | LOC_Os06g51400 | Os06g0730500 | - | Detail |
| C2H6g25487 | 6:27,229,298-27,238,781 | - | C1H6g28054 | CX6g045352 | LOC_Os06g51410 | Os06g0730600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030070 | 3:26,525,581-26,529,327 | - | C1H3g14731 | C2H3g28946 | LOC_Os03g49800 | Os03g0705300 | - | Detail |
| CX3g030047 | 3:26,534,338-26,534,673 | - | - | - | - | Os03g0705550 | - | Detail |
| CX3g028601 | 3:26,549,514-26,549,939 | + | - | - | - | Os03g0705433 | - | Detail |
| CX3g026164 | 3:26,578,171-26,579,481 | + | C1H3g17034 | C2H3g19805 | LOC_Os03g49830 | Os03g0705800 | - | Detail |
| CX3g026213 | 3:26,584,299-26,584,487 | - | - | - | - | - | - | Detail |
| CX3g026338 | 3:26,601,151-26,601,406 | + | - | - | - | - | - | Detail |
| CX3g028588 | 3:26,614,634-26,615,773 | + | - | - | LOC_Os03g49880 | Os03g0706500 | FC1, fc1, OsTB1, tb1, OsTB1/FC1, Os TB1, TB1, MP3 | Detail |
| CX3g026548 | 3:26,624,245-26,624,451 | - | - | - | - | - | - | Detail |
| CX3g028672 | 3:26,635,114-26,641,853 | - | C1H3g02900 | C2H3g09610 | LOC_Os03g49900 | Os03g0706900 | LE, TT3.1, DGS1 | Detail |
| CX3g028303 | 3:26,650,377-26,652,702 | + | C1H3g20914 | C2H3g07887 | LOC_Os03g49940 | Os03g0707200 | TT3.2 | Detail |
| CX3g029801 | 3:26,654,333-26,662,706 | - | C1H3g18351 | C2H3g17433 | LOC_Os03g49960 | Os03g0707300 | - | Detail |
| CX3g031168 | 3:26,674,470-26,674,640 | - | - | - | - | - | - | Detail |
| CX3g026414 | 3:26,677,263-26,677,451 | - | - | - | LOC_Os05g20914 | Os05g0285900 | - | Detail |
| CX3g028237 | 3:26,683,249-26,684,970 | + | C1H3g11049 | C2H3g19711 | LOC_Os03g49990 | Os03g0707600 | SLR1, slr1-1, slr1, slr, GAI, OsGAI, OsSLR1, Os SLR1 | Detail |
| CX3g027756 | 3:26,702,248-26,709,998 | - | C1H3g18483 | C2H3g19955 | LOC_Os03g50010 | Os03g0707900 | - | Detail |
| CX3g025431 | 3:26,715,442-26,716,268 | + | C1H3g03460 | C2H3g30153 | LOC_Os03g50030 | Os03g0708000 | - | Detail |
| CX3g025623 | 3:26,719,746-26,722,125 | - | C1H3g17884 | C2H3g07785 | LOC_Os03g50040 | Os03g0708100 | - | Detail |
| CX3g026490 | 3:26,724,310-26,725,509 | + | C1H3g18844 | C2H3g30385 | LOC_Os03g50050 | Os03g0708200 | - | Detail |
| CX3g026321 | 3:26,727,097-26,727,553 | - | - | - | - | Os03g0708250 | - | Detail |
| CX3g030384 | 3:26,728,717-26,732,054 | + | C1H3g20236 | C2H3g01941 | LOC_Os03g50070 | Os03g0708400 | - | Detail |