| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g24459 | 2:1,495,230-1,498,367 | + | C2H2g01875 | CX2g022118 | LOC_Os02g03860 | Os02g0131300 | - | Detail |
| C1H2g13894 | 2:1,501,498-1,508,193 | - | C2H2g19732 | CX2g019313 | LOC_Os02g03870 | Os02g0131400 | - | Detail |
| C1H2g25126 | 2:1,513,815-1,514,207 | - | - | CX2g023899 | - | - | - | Detail |
| C1H2g29540 | 2:1,518,426-1,518,683 | + | - | CX2g022522 | LOC_Os02g03880 | Os02g0131600 | - | Detail |
| C1H2g05041 | 2:1,519,692-1,523,049 | - | C2H2g21277 | CX2g020563 | LOC_Os02g03890 | Os02g0131700 | - | Detail |
| C1H2g18848 | 2:1,524,789-1,528,602 | - | C2H2g13835 | CX2g019095 | LOC_Os02g03900 | Os02g0131800 | NRAMP4, OsNRAMP4, Nrat1, Nramp6, OsNRAT1 | Detail |
| C1H2g00924 | 2:1,532,795-1,537,571 | - | C2H2g22540 | CX2g019802 | LOC_Os02g03930 | Os02g0132100 | - | Detail |
| C1H2g01456 | 2:1,538,000-1,541,517 | - | C2H2g12575 | CX2g018957 | LOC_Os02g03940 | Os02g0132200 | - | Detail |
| C1H2g17223 | 2:1,546,073-1,548,934 | + | C2H2g02428 | CX2g021626 | LOC_Os02g03950 | Os02g0132300 | - | Detail |
| C1H2g04467 | 2:1,560,120-1,560,732 | - | C2H2g10653 | CX2g021994 | LOC_Os02g03960 | Os02g0132500 | OsbZIP14 | Detail |
| C1H2g04799 | 2:1,572,574-1,581,526 | - | C2H2g24972 | CX2g024093 | LOC_Os02g03970 | Os02g0132600 | - | Detail |
| C1H2g29927 | 2:1,597,014-1,599,940 | - | C2H2g13962 | CX2g021970 | LOC_Os02g03990 | - | - | Detail |
| C1H2g20335 | 2:1,603,995-1,607,745 | - | C2H2g19617 | CX2g022112 | LOC_Os02g04010 | Os02g0133000 | - | Detail |
| C1H2g27472 | 2:1,613,761-1,618,866 | + | C2H2g07026 | CX2g024675 | LOC_Os02g04020 | Os02g0133100 | OsSec14-5 | Detail |
| C1H2g25242 | 2:1,619,453-1,623,665 | - | C2H2g19264 | CX2g019449 | LOC_Os02g04030 | Os02g0133200 | OsSec14-6 | Detail |
| C1H2g02951 | 2:1,624,793-1,634,812 | - | C2H2g26953 | CX2g024350 | LOC_Os02g04040 | Os02g0133300 | - | Detail |
| C1H2g30829 | 2:1,636,601-1,637,041 | - | C2H2g26953 | CX2g024350 | LOC_Os02g04060 | Os02g0133300 | - | Detail |
| C1H2g18206 | 2:1,638,458-1,646,512 | - | C2H2g26953 | CX2g019521 | LOC_Os02g04080 | Os02g0133400 | - | Detail |
| C1H2g21252 | 2:1,647,027-1,647,830 | - | C2H2g26953 | CX2g019521 | LOC_Os02g04090 | - | - | Detail |
| C1H2g25852 | 2:1,650,271-1,653,694 | + | C2H2g03692 | CX2g021792 | LOC_Os02g04100 | Os02g0133800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030070 | 3:26,525,581-26,529,327 | - | C1H3g14731 | C2H3g28946 | LOC_Os03g49800 | Os03g0705300 | - | Detail |
| CX3g030047 | 3:26,534,338-26,534,673 | - | - | - | - | Os03g0705550 | - | Detail |
| CX3g028601 | 3:26,549,514-26,549,939 | + | - | - | - | Os03g0705433 | - | Detail |
| CX3g026164 | 3:26,578,171-26,579,481 | + | C1H3g17034 | C2H3g19805 | LOC_Os03g49830 | Os03g0705800 | - | Detail |
| CX3g026213 | 3:26,584,299-26,584,487 | - | - | - | - | - | - | Detail |
| CX3g026338 | 3:26,601,151-26,601,406 | + | - | - | - | - | - | Detail |
| CX3g028588 | 3:26,614,634-26,615,773 | + | - | - | LOC_Os03g49880 | Os03g0706500 | FC1, fc1, OsTB1, tb1, OsTB1/FC1, Os TB1, TB1, MP3 | Detail |
| CX3g026548 | 3:26,624,245-26,624,451 | - | - | - | - | - | - | Detail |
| CX3g028672 | 3:26,635,114-26,641,853 | - | C1H3g02900 | C2H3g09610 | LOC_Os03g49900 | Os03g0706900 | LE, TT3.1, DGS1 | Detail |
| CX3g028303 | 3:26,650,377-26,652,702 | + | C1H3g20914 | C2H3g07887 | LOC_Os03g49940 | Os03g0707200 | TT3.2 | Detail |
| CX3g029801 | 3:26,654,333-26,662,706 | - | C1H3g18351 | C2H3g17433 | LOC_Os03g49960 | Os03g0707300 | - | Detail |
| CX3g031168 | 3:26,674,470-26,674,640 | - | - | - | - | - | - | Detail |
| CX3g026414 | 3:26,677,263-26,677,451 | - | - | - | LOC_Os05g20914 | Os05g0285900 | - | Detail |
| CX3g028237 | 3:26,683,249-26,684,970 | + | C1H3g11049 | C2H3g19711 | LOC_Os03g49990 | Os03g0707600 | SLR1, slr1-1, slr1, slr, GAI, OsGAI, OsSLR1, Os SLR1 | Detail |
| CX3g027756 | 3:26,702,248-26,709,998 | - | C1H3g18483 | C2H3g19955 | LOC_Os03g50010 | Os03g0707900 | - | Detail |
| CX3g025431 | 3:26,715,442-26,716,268 | + | C1H3g03460 | C2H3g30153 | LOC_Os03g50030 | Os03g0708000 | - | Detail |
| CX3g025623 | 3:26,719,746-26,722,125 | - | C1H3g17884 | C2H3g07785 | LOC_Os03g50040 | Os03g0708100 | - | Detail |
| CX3g026490 | 3:26,724,310-26,725,509 | + | C1H3g18844 | C2H3g30385 | LOC_Os03g50050 | Os03g0708200 | - | Detail |
| CX3g026321 | 3:26,727,097-26,727,553 | - | - | - | - | Os03g0708250 | - | Detail |
| CX3g030384 | 3:26,728,717-26,732,054 | + | C1H3g20236 | C2H3g01941 | LOC_Os03g50070 | Os03g0708400 | - | Detail |