| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g13984 | 7:15,296,860-15,301,004 | - | C2H7g16210 | - | LOC_Os07g31260 | Os07g0494900 | - | Detail |
| C1H7g09745 | 7:15,304,304-15,310,862 | + | C2H7g06678 | CX7g050370 | LOC_Os07g31270 | Os07g0495000 | - | Detail |
| C1H7g02274 | 7:15,313,935-15,316,246 | + | C2H7g14911 | CX7g046113 | LOC_Os07g31280 | Os07g0495100 | CK2beta3 | Detail |
| C1H7g11297 | 7:15,316,915-15,318,649 | + | C2H7g21816 | CX7g046113 | LOC_Os07g31280 | Os07g0495100 | CK2beta3 | Detail |
| C1H7g22433 | 7:15,324,434-15,327,238 | + | C2H7g25162 | CX7g046153 | LOC_Os07g31290 | Os07g0495150 | - | Detail |
| C1H7g05130 | 7:15,327,941-15,330,527 | - | C2H1g30518 | CX7g046823 | LOC_Os07g40350 | - | - | Detail |
| C1H7g08846 | 7:15,331,904-15,334,466 | - | C2H7g10499 | - | LOC_Os07g31300 | Os07g0495200 | - | Detail |
| C1H7g15686 | 7:15,337,425-15,342,403 | - | C2H7g00645 | CX7g049890 | LOC_Os07g31310 | Os07g0495300 | - | Detail |
| C1H7g31277 | 7:15,347,626-15,357,743 | + | C2H7g13842 | CX7g047105 | LOC_Os07g31340 | Os07g0495900 | - | Detail |
| C1H7g01583 | 7:15,362,175-15,366,111 | - | C2H7g19386 | CX7g046030 | LOC_Os07g31370 | Os07g0496000 | - | Detail |
| C1H7g11451 | 7:15,371,329-15,379,943 | + | C2H7g26295 | CX7g047287 | LOC_Os07g31380 | Os07g0496200 | - | Detail |
| C1H7g04210 | 7:15,382,025-15,383,312 | + | C2H7g17410 | CX7g047929 | LOC_Os07g31390 | Os07g0496250 | - | Detail |
| C1H7g27897 | 7:15,382,526-15,387,364 | - | C2H7g03817 | CX7g047317 | LOC_Os07g31400 | Os07g0496300 | - | Detail |
| C1H7g12901 | 7:15,387,936-15,392,749 | + | C2H3g15265 | CX1g004582 | - | - | - | Detail |
| C1H7g00750 | 7:15,399,756-15,404,077 | + | C2H7g24319 | CX7g049841 | - | - | - | Detail |
| C1H7g10037 | 7:15,410,857-15,413,806 | + | C2H7g12800 | CX7g046921 | LOC_Os07g31440 | Os07g0496900 | - | Detail |
| C1H7g08856 | 7:15,414,469-15,428,414 | - | C2H7g15940 | CX7g046829 | LOC_Os07g31450 | Os07g0497100 | CHR729, OsCHR4, CRL6 | Detail |
| C1H7g24819 | 7:15,431,976-15,442,574 | + | C2H7g17030 | CX7g048155 | LOC_Os07g31460 | Os07g0497400 | - | Detail |
| C1H7g17998 | 7:15,447,996-15,449,586 | - | C2H7g30562 | CX7g050276 | LOC_Os07g31470 | Os07g0497500 | Os2R_MYB70 | Detail |
| C1H7g28833 | 7:15,465,773-15,468,039 | + | C2H7g19743 | CX7g047097 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030070 | 3:26,525,581-26,529,327 | - | C1H3g14731 | C2H3g28946 | LOC_Os03g49800 | Os03g0705300 | - | Detail |
| CX3g030047 | 3:26,534,338-26,534,673 | - | - | - | - | Os03g0705550 | - | Detail |
| CX3g028601 | 3:26,549,514-26,549,939 | + | - | - | - | Os03g0705433 | - | Detail |
| CX3g026164 | 3:26,578,171-26,579,481 | + | C1H3g17034 | C2H3g19805 | LOC_Os03g49830 | Os03g0705800 | - | Detail |
| CX3g026213 | 3:26,584,299-26,584,487 | - | - | - | - | - | - | Detail |
| CX3g026338 | 3:26,601,151-26,601,406 | + | - | - | - | - | - | Detail |
| CX3g028588 | 3:26,614,634-26,615,773 | + | - | - | LOC_Os03g49880 | Os03g0706500 | FC1, fc1, OsTB1, tb1, OsTB1/FC1, Os TB1, TB1, MP3 | Detail |
| CX3g026548 | 3:26,624,245-26,624,451 | - | - | - | - | - | - | Detail |
| CX3g028672 | 3:26,635,114-26,641,853 | - | C1H3g02900 | C2H3g09610 | LOC_Os03g49900 | Os03g0706900 | LE, TT3.1, DGS1 | Detail |
| CX3g028303 | 3:26,650,377-26,652,702 | + | C1H3g20914 | C2H3g07887 | LOC_Os03g49940 | Os03g0707200 | TT3.2 | Detail |
| CX3g029801 | 3:26,654,333-26,662,706 | - | C1H3g18351 | C2H3g17433 | LOC_Os03g49960 | Os03g0707300 | - | Detail |
| CX3g031168 | 3:26,674,470-26,674,640 | - | - | - | - | - | - | Detail |
| CX3g026414 | 3:26,677,263-26,677,451 | - | - | - | LOC_Os05g20914 | Os05g0285900 | - | Detail |
| CX3g028237 | 3:26,683,249-26,684,970 | + | C1H3g11049 | C2H3g19711 | LOC_Os03g49990 | Os03g0707600 | SLR1, slr1-1, slr1, slr, GAI, OsGAI, OsSLR1, Os SLR1 | Detail |
| CX3g027756 | 3:26,702,248-26,709,998 | - | C1H3g18483 | C2H3g19955 | LOC_Os03g50010 | Os03g0707900 | - | Detail |
| CX3g025431 | 3:26,715,442-26,716,268 | + | C1H3g03460 | C2H3g30153 | LOC_Os03g50030 | Os03g0708000 | - | Detail |
| CX3g025623 | 3:26,719,746-26,722,125 | - | C1H3g17884 | C2H3g07785 | LOC_Os03g50040 | Os03g0708100 | - | Detail |
| CX3g026490 | 3:26,724,310-26,725,509 | + | C1H3g18844 | C2H3g30385 | LOC_Os03g50050 | Os03g0708200 | - | Detail |
| CX3g026321 | 3:26,727,097-26,727,553 | - | - | - | - | Os03g0708250 | - | Detail |
| CX3g030384 | 3:26,728,717-26,732,054 | + | C1H3g20236 | C2H3g01941 | LOC_Os03g50070 | Os03g0708400 | - | Detail |