| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g03470 | 8:13,577,023-13,579,953 | - | - | - | - | - | - | Detail |
| C2H8g05568 | 8:13,582,976-13,586,790 | + | C1H1g25658 | CX1g001438 | LOC_Os01g68450 | Os01g0912700 | - | Detail |
| C2H8g28308 | 8:13,670,284-13,672,745 | - | C1H8g19336 | CX8g054300 | LOC_Os08g26820 | Os08g0356500 | - | Detail |
| C2H8g20766 | 8:13,703,983-13,705,663 | - | C1H8g18441 | CX8g051633 | LOC_Os08g26850 | Os08g0356800 | - | Detail |
| C2H8g22181 | 8:13,712,617-13,717,321 | - | C1H8g10235 | CX8g052874 | LOC_Os08g26870 | Os08g0357000 | - | Detail |
| C2H8g00680 | 8:13,745,023-13,746,303 | + | C1H8g07010 | CX8g053523 | LOC_Os08g26880 | Os08g0357300 | bZIP65 | Detail |
| C2H8g07337 | 8:13,803,004-13,803,815 | + | C1H8g29066 | CX8g053242 | LOC_Os08g26990 | Os08g0377200 | RR12, OsRR12, Rra11, OsRR8, OsRRA11 | Detail |
| C2H8g28936 | 8:13,810,816-13,814,519 | + | C1H8g02454 | CX8g054278 | LOC_Os08g27010 | Os08g0359000 | - | Detail |
| C2H8g09133 | 8:13,817,706-13,822,759 | - | C1H8g02680 | CX8g051553 | LOC_Os08g27030 | Os08g0359100 | - | Detail |
| C2H8g00972 | 8:13,825,952-13,829,128 | - | C1H8g21753 | CX8g051553 | LOC_Os08g27040 | Os08g0359100 | - | Detail |
| C2H8g00818 | 8:13,829,617-13,831,428 | - | - | CX8g050425 | - | - | - | Detail |
| C2H8g23684 | 8:13,834,603-13,839,570 | - | C1H8g11326 | CX8g051132 | LOC_Os08g27050 | Os08g0359300 | - | Detail |
| C2H8g05827 | 8:13,875,303-13,879,906 | - | C1H8g05675 | CX8g052155 | LOC_Os08g27070 | Os08g0359500 | - | Detail |
| C2H8g05453 | 8:13,883,180-13,887,503 | - | C1H8g22429 | CX8g052785 | LOC_Os08g27090 | Os08g0359600 | - | Detail |
| C2H8g14900 | 8:13,917,394-13,918,064 | + | C1H8g04623 | CX8g051829 | LOC_Os08g27140 | Os08g0360000 | - | Detail |
| C2H8g24252 | 8:13,918,815-13,922,430 | - | C1H8g06614 | CX8g052599 | LOC_Os08g27150 | Os08g0360100 | - | Detail |
| C2H8g16891 | 8:13,923,140-13,923,698 | + | C1H8g29721 | CX8g051857 | LOC_Os08g27160 | Os08g0360200 | - | Detail |
| C2H8g28437 | 8:13,929,873-13,932,848 | + | C1H8g02142 | CX8g054158 | LOC_Os08g27170 | Os08g0360300 | - | Detail |
| C2H8g27311 | 8:13,964,161-13,966,242 | + | C1H8g26175 | CX8g054575 | LOC_Os08g27240 | Os08g0361000 | - | Detail |
| C2H8g23103 | 8:13,966,803-13,969,135 | + | C1H8g19308 | CX8g054575 | LOC_Os08g27240 | Os08g0451700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030273 | 3:26,391,664-26,393,082 | + | C1H3g02000 | C2H3g03163 | LOC_Os03g49550 | Os03g0702500 | - | Detail |
| CX3g028545 | 3:26,405,426-26,406,028 | - | - | - | LOC_Os03g49560 | Os03g0702600 | - | Detail |
| CX3g027117 | 3:26,410,064-26,410,414 | - | C1H3g13432 | C2H3g00836 | LOC_Os03g51050 | Os03g0235700 | - | Detail |
| CX3g029283 | 3:26,413,076-26,417,270 | + | C1H3g01842 | C2H3g18085 | LOC_Os03g49570 | Os03g0702700 | - | Detail |
| CX3g025067 | 3:26,421,518-26,422,831 | + | C1H7g21618 | C2H7g09412 | LOC_Os03g49580 | Os03g0702800 | - | Detail |
| CX3g025714 | 3:26,423,141-26,423,794 | - | C1H3g13716 | C2H3g29993 | LOC_Os03g49590 | Os03g0702900 | - | Detail |
| CX3g027255 | 3:26,424,419-26,428,281 | - | C1H3g15421 | C2H3g11714 | LOC_Os03g49600 | Os03g0703000 | - | Detail |
| CX3g027190 | 3:26,431,052-26,435,910 | - | C1H3g29071 | C2H3g22582 | LOC_Os03g49610 | Os03g0703100 | - | Detail |
| CX3g028984 | 3:26,436,634-26,440,613 | - | C1H3g29286 | C2H3g04815 | LOC_Os03g49620 | Os03g0264300 | - | Detail |
| CX3g026534 | 3:26,442,891-26,448,607 | - | C1H3g20716 | C2H3g29194 | LOC_Os03g49630 | Os03g0703300 | - | Detail |
| CX3g027729 | 3:26,451,832-26,457,305 | - | C1H3g05428 | C2H3g01101 | LOC_Os03g49640 | Os03g0703400 | OsCSL1, MKKK22 | Detail |
| CX3g031175 | 3:26,464,362-26,464,982 | + | C1H3g02932 | C2H3g22172 | - | Os03g0703600 | - | Detail |
| CX3g024968 | 3:26,467,390-26,468,818 | - | C1H3g11848 | C2H3g01738 | LOC_Os03g49680 | Os03g0141700 | - | Detail |
| CX3g028108 | 3:26,472,507-26,475,136 | + | C1H3g27763 | C2H3g29973 | LOC_Os03g49700 | Os03g0703900 | - | Detail |
| CX3g026571 | 3:26,476,324-26,477,945 | + | C1H3g27362 | C2H3g13190 | LOC_Os03g49710 | Os03g0704000 | - | Detail |
| CX3g029652 | 3:26,479,827-26,482,473 | + | C1H3g23851 | C2H3g08604 | LOC_Os03g49720 | Os03g0704100 | - | Detail |
| CX3g029894 | 3:26,487,402-26,492,323 | + | C1H3g28557 | C2H3g16102 | LOC_Os03g49750 | Os03g0704400 | - | Detail |
| CX3g029734 | 3:26,499,888-26,500,043 | + | - | - | - | - | - | Detail |
| CX3g026920 | 3:26,502,180-26,510,963 | + | C1H3g03526 | C2H3g11078 | LOC_Os03g49770 | Os03g0704700 | ORP1C | Detail |
| CX3g030293 | 3:26,523,322-26,523,501 | - | - | - | - | - | - | Detail |