| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g16335 | 1:36,969,708-36,972,923 | + | C2H1g26876 | CX1g003320 | LOC_Os01g71380 | Os01g0946700 | OsGLN1 | Detail |
| C1H1g28153 | 1:36,975,055-36,982,346 | + | C2H1g25982 | CX1g005350 | LOC_Os01g71960 | Os01g0948100 | OsMus81, OsMus81beta, OsMus81β | Detail |
| C1H1g11535 | 1:36,995,688-36,997,016 | + | C2H1g13478 | CX1g002069 | LOC_Os01g71970 | Os01g0948200 | OsDLA | Detail |
| C1H1g04988 | 1:36,999,122-37,001,615 | + | C2H1g24573 | CX1g003090 | LOC_Os01g71980 | Os01g0948300 | - | Detail |
| C1H1g12107 | 1:37,001,585-37,004,649 | - | C2H1g07613 | CX1g004443 | LOC_Os01g71990 | Os01g0948400 | OsP5CR | Detail |
| C1H1g04245 | 1:37,005,232-37,009,159 | - | C2H1g30437 | CX1g001292 | LOC_Os01g72000 | Os01g0948500 | - | Detail |
| C1H1g24544 | 1:37,024,281-37,027,744 | - | C2H1g07385 | CX1g006785 | LOC_Os01g72020 | Os01g0948900 | OsBOP1, NH4 | Detail |
| C1H1g23618 | 1:37,063,151-37,067,802 | - | C2H1g13462 | CX1g002411 | LOC_Os01g72049 | Os01g0949060 | - | Detail |
| C1H1g17659 | 1:37,075,795-37,076,391 | + | C2H1g16329 | CX1g003732 | LOC_Os01g72080 | Os01g0949300 | - | Detail |
| C1H1g24211 | 1:37,079,793-37,082,622 | - | C2H1g17329 | CX1g003977 | LOC_Os01g72090 | Os01g0949400 | - | Detail |
| C1H1g05070 | 1:37,083,927-37,084,484 | - | C2H1g08758 | CX1g004333 | LOC_Os01g72100 | Os01g0949500 | - | Detail |
| C1H1g07252 | 1:37,094,149-37,095,200 | + | C2H1g28530 | CX1g001038 | LOC_Os01g72120 | Os01g0949700 | - | Detail |
| C1H1g22384 | 1:37,095,717-37,096,507 | + | C2H1g18539 | CX1g001038 | LOC_Os01g72130 | Os01g0949750 | - | Detail |
| C1H1g30242 | 1:37,098,253-37,099,383 | + | C2H1g25830 | CX1g001038 | LOC_Os01g72140 | Os01g0949800 | - | Detail |
| C1H1g00771 | 1:37,100,645-37,101,455 | + | C2H1g25821 | CX1g001038 | LOC_Os01g72150 | Os01g0949800 | - | Detail |
| C1H1g09413 | 1:37,101,931-37,102,733 | + | C2H1g04599 | CX1g001038 | LOC_Os01g72160 | Os01g0950000 | - | Detail |
| C1H1g16006 | 1:37,105,115-37,105,828 | + | C2H1g22758 | CX1g001038 | LOC_Os01g72170 | Os01g0950000 | - | Detail |
| C1H1g15694 | 1:37,110,283-37,111,721 | + | C2H1g19803 | CX1g001087 | LOC_Os01g72190 | - | - | Detail |
| C1H1g31521 | 1:37,113,544-37,114,611 | - | - | CX1g004052 | LOC_Os01g72200 | Os01g0950800 | - | Detail |
| C1H1g27599 | 1:37,115,935-37,117,015 | - | C2H1g09890 | CX1g000649 | LOC_Os01g72205 | Os01g0950866 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030273 | 3:26,391,664-26,393,082 | + | C1H3g02000 | C2H3g03163 | LOC_Os03g49550 | Os03g0702500 | - | Detail |
| CX3g028545 | 3:26,405,426-26,406,028 | - | - | - | LOC_Os03g49560 | Os03g0702600 | - | Detail |
| CX3g027117 | 3:26,410,064-26,410,414 | - | C1H3g13432 | C2H3g00836 | LOC_Os03g51050 | Os03g0235700 | - | Detail |
| CX3g029283 | 3:26,413,076-26,417,270 | + | C1H3g01842 | C2H3g18085 | LOC_Os03g49570 | Os03g0702700 | - | Detail |
| CX3g025067 | 3:26,421,518-26,422,831 | + | C1H7g21618 | C2H7g09412 | LOC_Os03g49580 | Os03g0702800 | - | Detail |
| CX3g025714 | 3:26,423,141-26,423,794 | - | C1H3g13716 | C2H3g29993 | LOC_Os03g49590 | Os03g0702900 | - | Detail |
| CX3g027255 | 3:26,424,419-26,428,281 | - | C1H3g15421 | C2H3g11714 | LOC_Os03g49600 | Os03g0703000 | - | Detail |
| CX3g027190 | 3:26,431,052-26,435,910 | - | C1H3g29071 | C2H3g22582 | LOC_Os03g49610 | Os03g0703100 | - | Detail |
| CX3g028984 | 3:26,436,634-26,440,613 | - | C1H3g29286 | C2H3g04815 | LOC_Os03g49620 | Os03g0264300 | - | Detail |
| CX3g026534 | 3:26,442,891-26,448,607 | - | C1H3g20716 | C2H3g29194 | LOC_Os03g49630 | Os03g0703300 | - | Detail |
| CX3g027729 | 3:26,451,832-26,457,305 | - | C1H3g05428 | C2H3g01101 | LOC_Os03g49640 | Os03g0703400 | OsCSL1, MKKK22 | Detail |
| CX3g031175 | 3:26,464,362-26,464,982 | + | C1H3g02932 | C2H3g22172 | - | Os03g0703600 | - | Detail |
| CX3g024968 | 3:26,467,390-26,468,818 | - | C1H3g11848 | C2H3g01738 | LOC_Os03g49680 | Os03g0141700 | - | Detail |
| CX3g028108 | 3:26,472,507-26,475,136 | + | C1H3g27763 | C2H3g29973 | LOC_Os03g49700 | Os03g0703900 | - | Detail |
| CX3g026571 | 3:26,476,324-26,477,945 | + | C1H3g27362 | C2H3g13190 | LOC_Os03g49710 | Os03g0704000 | - | Detail |
| CX3g029652 | 3:26,479,827-26,482,473 | + | C1H3g23851 | C2H3g08604 | LOC_Os03g49720 | Os03g0704100 | - | Detail |
| CX3g029894 | 3:26,487,402-26,492,323 | + | C1H3g28557 | C2H3g16102 | LOC_Os03g49750 | Os03g0704400 | - | Detail |
| CX3g029734 | 3:26,499,888-26,500,043 | + | - | - | - | - | - | Detail |
| CX3g026920 | 3:26,502,180-26,510,963 | + | C1H3g03526 | C2H3g11078 | LOC_Os03g49770 | Os03g0704700 | ORP1C | Detail |
| CX3g030293 | 3:26,523,322-26,523,501 | - | - | - | - | - | - | Detail |