| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g22521 | 7:20,927,598-20,929,277 | + | C2H7g23102 | CX7g047968 | LOC_Os07g41240 | Os07g0603700 | GE1, ge1, ge, CYP78A13, OsCYP78A13, GE, BG2 | Detail |
| C1H7g18114 | 7:20,933,162-20,936,565 | + | C2H7g24085 | CX7g047799 | LOC_Os07g41250 | Os07g0603800 | OsNPF7.1a, OsNPF7.1 | Detail |
| C1H7g27139 | 7:20,937,377-20,943,411 | + | C2H7g27266 | CX7g046521 | LOC_Os07g41260 | Os07g0603900 | - | Detail |
| C1H7g22892 | 7:20,945,402-20,950,594 | + | C2H7g11752 | CX7g047916 | LOC_Os07g41280 | Os07g0604000 | - | Detail |
| C1H7g01109 | 7:20,954,082-20,954,523 | + | C2H7g10698 | - | LOC_Os07g41290 | Os07g0604100 | - | Detail |
| C1H7g15311 | 7:20,960,472-20,963,651 | + | C2H7g19715 | CX7g050327 | LOC_Os07g41310 | Os07g0604300 | OsBC1L6 | Detail |
| C1H7g09407 | 7:20,964,185-20,967,260 | - | C2H7g04451 | CX7g048924 | LOC_Os07g41320 | Os07g0604400 | - | Detail |
| C1H7g14121 | 7:20,970,874-20,971,398 | - | C2H7g30044 | CX7g047325 | LOC_Os07g41330 | Os07g0604550 | - | Detail |
| C1H7g30183 | 7:20,971,779-20,972,450 | - | C2H7g30044 | CX7g050196 | LOC_Os07g41330 | Os07g0604500 | - | Detail |
| C1H7g26293 | 7:20,974,692-20,975,541 | + | C2H7g28680 | - | LOC_Os07g41340 | Os07g0604600 | - | Detail |
| C1H7g13277 | 7:20,977,703-20,978,330 | + | C2H7g05768 | - | LOC_Os07g41350 | Os07g0604700 | OsB12D1 | Detail |
| C1H7g04285 | 7:20,983,322-20,986,593 | + | C2H7g30253 | CX7g046180 | LOC_Os07g41360 | Os07g0604800 | UAM3, OsUAM3 | Detail |
| C1H7g19964 | 7:20,998,397-21,005,744 | + | C2H7g00539 | CX7g048061 | LOC_Os07g41370 | Os07g0605200 | MADS18, OsMADS18, MADS2, OsMADS2, MADS28, OsMADS28, FDRMADS7, OsMADS18/28 | Detail |
| C1H7g17497 | 7:21,007,308-21,007,836 | + | C2H7g17393 | CX7g050225 | - | Os07g0605275 | - | Detail |
| C1H7g11179 | 7:21,010,935-21,011,156 | + | C2H7g17393 | CX7g050225 | LOC_Os07g41400 | Os07g0605350 | - | Detail |
| C1H7g29119 | 7:21,011,404-21,011,891 | + | C2H7g14198 | - | - | - | - | Detail |
| C1H7g10268 | 7:21,013,786-21,014,262 | + | C2H7g17393 | CX7g047433 | LOC_Os07g41410 | Os07g0605400 | - | Detail |
| C1H7g18805 | 7:21,038,133-21,039,173 | - | C2H7g17255 | CX7g047919 | LOC_Os07g41460 | Os07g0605800 | - | Detail |
| C1H7g26886 | 7:21,045,223-21,053,317 | + | C2H7g18823 | CX7g048068 | LOC_Os07g41570 | Os07g0606500 | - | Detail |
| C1H7g06861 | 7:21,059,528-21,060,205 | - | C2H7g12438 | - | LOC_Os07g41580 | Os07g0606600 | OsNF-YB10, HAP3F | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030273 | 3:26,391,664-26,393,082 | + | C1H3g02000 | C2H3g03163 | LOC_Os03g49550 | Os03g0702500 | - | Detail |
| CX3g028545 | 3:26,405,426-26,406,028 | - | - | - | LOC_Os03g49560 | Os03g0702600 | - | Detail |
| CX3g027117 | 3:26,410,064-26,410,414 | - | C1H3g13432 | C2H3g00836 | LOC_Os03g51050 | Os03g0235700 | - | Detail |
| CX3g029283 | 3:26,413,076-26,417,270 | + | C1H3g01842 | C2H3g18085 | LOC_Os03g49570 | Os03g0702700 | - | Detail |
| CX3g025067 | 3:26,421,518-26,422,831 | + | C1H7g21618 | C2H7g09412 | LOC_Os03g49580 | Os03g0702800 | - | Detail |
| CX3g025714 | 3:26,423,141-26,423,794 | - | C1H3g13716 | C2H3g29993 | LOC_Os03g49590 | Os03g0702900 | - | Detail |
| CX3g027255 | 3:26,424,419-26,428,281 | - | C1H3g15421 | C2H3g11714 | LOC_Os03g49600 | Os03g0703000 | - | Detail |
| CX3g027190 | 3:26,431,052-26,435,910 | - | C1H3g29071 | C2H3g22582 | LOC_Os03g49610 | Os03g0703100 | - | Detail |
| CX3g028984 | 3:26,436,634-26,440,613 | - | C1H3g29286 | C2H3g04815 | LOC_Os03g49620 | Os03g0264300 | - | Detail |
| CX3g026534 | 3:26,442,891-26,448,607 | - | C1H3g20716 | C2H3g29194 | LOC_Os03g49630 | Os03g0703300 | - | Detail |
| CX3g027729 | 3:26,451,832-26,457,305 | - | C1H3g05428 | C2H3g01101 | LOC_Os03g49640 | Os03g0703400 | OsCSL1, MKKK22 | Detail |
| CX3g031175 | 3:26,464,362-26,464,982 | + | C1H3g02932 | C2H3g22172 | - | Os03g0703600 | - | Detail |
| CX3g024968 | 3:26,467,390-26,468,818 | - | C1H3g11848 | C2H3g01738 | LOC_Os03g49680 | Os03g0141700 | - | Detail |
| CX3g028108 | 3:26,472,507-26,475,136 | + | C1H3g27763 | C2H3g29973 | LOC_Os03g49700 | Os03g0703900 | - | Detail |
| CX3g026571 | 3:26,476,324-26,477,945 | + | C1H3g27362 | C2H3g13190 | LOC_Os03g49710 | Os03g0704000 | - | Detail |
| CX3g029652 | 3:26,479,827-26,482,473 | + | C1H3g23851 | C2H3g08604 | LOC_Os03g49720 | Os03g0704100 | - | Detail |
| CX3g029894 | 3:26,487,402-26,492,323 | + | C1H3g28557 | C2H3g16102 | LOC_Os03g49750 | Os03g0704400 | - | Detail |
| CX3g029734 | 3:26,499,888-26,500,043 | + | - | - | - | - | - | Detail |
| CX3g026920 | 3:26,502,180-26,510,963 | + | C1H3g03526 | C2H3g11078 | LOC_Os03g49770 | Os03g0704700 | ORP1C | Detail |
| CX3g030293 | 3:26,523,322-26,523,501 | - | - | - | - | - | - | Detail |