| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g15323 | 7:2,997,345-2,999,550 | - | C1H7g31839 | CX7g050004 | LOC_Os07g06660 | Os07g0160400 | - | Detail |
| C2H7g04792 | 7:3,005,158-3,006,950 | + | C1H7g10977 | CX7g049818 | LOC_Os07g06670 | Os07g0160500 | - | Detail |
| C2H7g20200 | 7:3,010,160-3,013,488 | + | C1H7g30967 | CX7g046783 | LOC_Os07g06680 | Os07g0160600 | - | Detail |
| C2H7g10241 | 7:3,025,783-3,031,415 | - | C1H7g30885 | CX7g047372 | LOC_Os07g06710 | Os07g0161000 | - | Detail |
| C2H7g20288 | 7:3,034,009-3,036,013 | + | C1H7g26727 | CX7g046953 | LOC_Os07g06730 | Os07g0161500 | - | Detail |
| C2H7g04340 | 7:3,037,088-3,041,876 | - | C1H7g06448 | CX7g049860 | LOC_Os07g06740 | Os07g0161600 | CDPK17, OsCPK17 | Detail |
| C2H7g01138 | 7:3,044,727-3,045,254 | + | - | CX7g048179 | LOC_Os07g06750 | Os07g0161700 | - | Detail |
| C2H7g11082 | 7:3,059,356-3,061,108 | - | C1H7g15459 | CX7g048571 | LOC_Os07g06800 | Os07g0162100 | - | Detail |
| C2H7g29889 | 7:3,063,347-3,064,201 | - | - | CX7g049835 | LOC_Os07g06810 | Os07g0162200 | - | Detail |
| C2H7g01313 | 7:3,065,305-3,070,302 | + | C1H7g24248 | CX7g049055 | LOC_Os07g06820 | Os07g0162300 | - | Detail |
| C2H7g28686 | 7:3,074,945-3,075,937 | - | C1H7g03092 | CX7g048930 | LOC_Os07g06830 | Os07g0162400 | - | Detail |
| C2H7g04371 | 7:3,081,209-3,082,192 | - | C1H7g12903 | CX7g048930 | LOC_Os07g06840 | Os07g0162500 | - | Detail |
| C2H7g19297 | 7:3,084,191-3,085,195 | - | C1H7g03092 | CX7g048930 | LOC_Os07g06850 | Os07g0162600 | - | Detail |
| C2H7g23395 | 7:3,092,483-3,093,529 | - | C1H7g03092 | CX7g047650 | LOC_Os07g06860 | Os07g0162700 | - | Detail |
| C2H7g13583 | 7:3,109,890-3,110,882 | - | C1H7g03092 | CX7g048930 | LOC_Os07g06880 | Os07g0162900 | - | Detail |
| C2H7g15677 | 7:3,112,928-3,119,804 | - | C1H7g06281 | CX7g049022 | LOC_Os07g06890 | Os07g0163000 | OsD-LDH, D-LDH, OsD-LDH-Tr | Detail |
| C2H7g11414 | 7:3,122,576-3,124,884 | - | C1H7g03136 | CX7g046953 | LOC_Os07g06900 | Os07g0163200 | - | Detail |
| C2H7g28250 | 7:3,127,611-3,128,989 | - | C1H7g06104 | CX7g050145 | LOC_Os07g06910 | - | - | Detail |
| C2H7g28897 | 7:3,141,972-3,154,158 | + | C1H7g10635 | CX7g047813 | LOC_Os07g06940 | Os07g0163500 | WP1, OsValRS2, ValRS2 | Detail |
| C2H7g16342 | 7:3,162,056-3,173,815 | + | C1H7g30562 | CX7g047695 | LOC_Os07g06950 | Os07g0163800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007045 | 1:17,066,172-17,066,561 | - | - | - | LOC_Os01g32890 | Os01g0512400 | - | Detail |
| CX1g001290 | 1:17,068,462-17,076,326 | + | C1H1g22771 | C2H1g03966 | LOC_Os01g32920 | Os01g0512700 | - | Detail |
| CX1g001406 | 1:17,078,943-17,079,682 | + | C1H1g27769 | C2H1g26017 | LOC_Os01g32930 | Os01g0512800 | - | Detail |
| CX1g004321 | 1:17,083,509-17,090,915 | - | C1H1g02880 | C2H1g24494 | LOC_Os01g32964 | Os01g0513100 | - | Detail |
| CX1g004574 | 1:17,101,007-17,109,977 | - | C1H1g13876 | C2H1g05942 | LOC_Os01g32980 | Os01g0513200 | - | Detail |
| CX1g003028 | 1:17,117,974-17,121,077 | + | C1H1g02604 | C2H1g28038 | LOC_Os01g33000 | Os01g0513400 | - | Detail |
| CX1g006725 | 1:17,127,566-17,128,971 | - | C1H1g22987 | C2H1g27810 | LOC_Os01g33020 | Os01g0513700 | - | Detail |
| CX1g007248 | 1:17,130,880-17,132,580 | - | C1H1g30759 | C2H1g12307 | LOC_Os01g33030 | Os01g0513800 | - | Detail |
| CX1g000085 | 1:17,141,800-17,142,163 | - | - | C2H12g28081 | LOC_Os02g35120 | Os06g0629362 | - | Detail |
| CX1g000923 | 1:17,150,066-17,155,022 | + | C1H1g09298 | C2H1g12454 | LOC_Os01g33040 | Os01g0513900 | - | Detail |
| CX1g002054 | 1:17,158,686-17,161,197 | - | C1H1g02667 | C2H1g17423 | LOC_Os01g33050 | Os01g0514000 | - | Detail |
| CX1g000762 | 1:17,161,549-17,171,101 | + | C1H1g14994 | C2H1g15853 | LOC_Os01g33060 | Os01g0514300 | - | Detail |
| CX1g002835 | 1:17,174,267-17,175,388 | + | C1H1g01968 | C2H1g02122 | LOC_Os01g33070 | Os01g0514450 | - | Detail |
| CX1g003510 | 1:17,186,072-17,192,124 | + | C1H1g23037 | C2H1g28988 | LOC_Os01g33080 | Os01g0514600 | - | Detail |
| CX1g002745 | 1:17,200,497-17,203,032 | + | C1H1g14522 | C2H1g05248 | LOC_Os01g33090 | Os01g0514700 | - | Detail |
| CX1g001599 | 1:17,240,170-17,242,291 | - | C1H1g14011 | C2H1g29780 | LOC_Os01g34410 | Os01g0527900 | - | Detail |
| CX1g000632 | 1:17,252,968-17,257,063 | - | C1H1g13083 | C2H1g29427 | LOC_Os01g33230 | Os01g0516700 | - | Detail |
| CX1g003534 | 1:17,260,150-17,260,503 | + | - | C2H1g12851 | - | - | - | Detail |
| CX1g005992 | 1:17,261,226-17,276,897 | - | C1H1g03571 | C2H1g22414 | LOC_Os01g33260 | Os01g0516900 | - | Detail |
| CX1g001381 | 1:17,308,454-17,309,688 | - | C1H1g15043 | C2H1g19175 | LOC_Os01g33350 | Os01g0517800 | OsFl3 | Detail |