| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g09840 | 9:18,366,642-18,367,800 | - | C2H9g28554 | CX9g056393 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| C1H9g15676 | 9:18,371,536-18,373,702 | + | C2H9g14226 | CX9g054872 | LOC_Os09g38000 | Os09g0552800 | OsNAC109, YL3 | Detail |
| C1H9g26813 | 9:18,376,273-18,378,404 | + | C2H9g12533 | CX9g057788 | LOC_Os09g38010 | Os09g0552900 | - | Detail |
| C1H9g21147 | 9:18,380,724-18,381,035 | - | C2H2g23208 | CX9g057780 | LOC_Os09g38020 | Os09g0553100 | - | Detail |
| C1H9g17635 | 9:18,385,462-18,390,603 | + | C2H9g10941 | CX9g055376 | LOC_Os09g38030 | Os09g0553200 | UGP1, Ugp1, OsUgp1, UGP2, UGP3 | Detail |
| C1H9g26934 | 9:18,391,442-18,394,187 | - | C2H9g21953 | CX9g058064 | LOC_Os09g38040 | Os09g0553300 | - | Detail |
| C1H9g10869 | 9:18,398,653-18,402,515 | + | C2H9g19006 | CX9g056104 | LOC_Os09g38060 | Os09g0553600 | - | Detail |
| C1H9g05696 | 9:18,405,039-18,405,896 | - | C2H9g11910 | - | LOC_Os09g38070 | Os09g0553700 | - | Detail |
| C1H9g00595 | 9:18,408,908-18,410,734 | + | C2H9g05592 | CX9g057943 | LOC_Os09g38080 | Os09g0553800 | - | Detail |
| C1H9g10302 | 9:18,411,472-18,414,138 | + | - | CX9g057138 | LOC_Os09g38090 | Os09g0553900 | - | Detail |
| C1H9g31011 | 9:18,415,061-18,417,614 | - | C2H9g14746 | CX9g057604 | LOC_Os09g38100 | Os09g0554000 | - | Detail |
| C1H9g27301 | 9:18,421,254-18,421,862 | - | C2H9g14838 | CX9g055725 | LOC_Os09g38110 | Os09g0554200 | - | Detail |
| C1H9g27672 | 9:18,429,105-18,433,133 | + | C2H9g06100 | CX9g057048 | LOC_Os09g38130 | Os09g0554300 | OsPILS7a | Detail |
| C1H9g18495 | 9:18,439,341-18,441,965 | + | C2H9g06100 | CX9g057828 | LOC_Os09g38210 | Os09g0555100 | - | Detail |
| C1H9g05514 | 9:18,444,982-18,446,160 | + | C2H9g22067 | CX9g057828 | LOC_Os09g38239 | Os09g0555150 | - | Detail |
| C1H9g12988 | 9:18,449,968-18,464,984 | + | C2H9g17283 | CX9g057564 | LOC_Os09g38268 | Os09g0555200 | OsNRPD1b, OsNRPD1 | Detail |
| C1H9g08888 | 9:18,466,459-18,468,222 | + | - | CX9g057692 | LOC_Os09g38300 | Os09g0555300 | - | Detail |
| C1H9g16951 | 9:18,470,967-18,472,877 | - | C2H9g07064 | CX9g057467 | LOC_Os09g38310 | Os09g0555400 | - | Detail |
| C1H9g00138 | 9:18,474,359-18,477,136 | - | C2H9g08531 | CX9g056693 | LOC_Os09g38320 | Os09g0555500 | OsPSY3 | Detail |
| C1H9g26155 | 9:18,480,718-18,489,628 | - | C2H9g15848 | CX9g056039 | LOC_Os09g38330 | Os09g0555600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007045 | 1:17,066,172-17,066,561 | - | - | - | LOC_Os01g32890 | Os01g0512400 | - | Detail |
| CX1g001290 | 1:17,068,462-17,076,326 | + | C1H1g22771 | C2H1g03966 | LOC_Os01g32920 | Os01g0512700 | - | Detail |
| CX1g001406 | 1:17,078,943-17,079,682 | + | C1H1g27769 | C2H1g26017 | LOC_Os01g32930 | Os01g0512800 | - | Detail |
| CX1g004321 | 1:17,083,509-17,090,915 | - | C1H1g02880 | C2H1g24494 | LOC_Os01g32964 | Os01g0513100 | - | Detail |
| CX1g004574 | 1:17,101,007-17,109,977 | - | C1H1g13876 | C2H1g05942 | LOC_Os01g32980 | Os01g0513200 | - | Detail |
| CX1g003028 | 1:17,117,974-17,121,077 | + | C1H1g02604 | C2H1g28038 | LOC_Os01g33000 | Os01g0513400 | - | Detail |
| CX1g006725 | 1:17,127,566-17,128,971 | - | C1H1g22987 | C2H1g27810 | LOC_Os01g33020 | Os01g0513700 | - | Detail |
| CX1g007248 | 1:17,130,880-17,132,580 | - | C1H1g30759 | C2H1g12307 | LOC_Os01g33030 | Os01g0513800 | - | Detail |
| CX1g000085 | 1:17,141,800-17,142,163 | - | - | C2H12g28081 | LOC_Os02g35120 | Os06g0629362 | - | Detail |
| CX1g000923 | 1:17,150,066-17,155,022 | + | C1H1g09298 | C2H1g12454 | LOC_Os01g33040 | Os01g0513900 | - | Detail |
| CX1g002054 | 1:17,158,686-17,161,197 | - | C1H1g02667 | C2H1g17423 | LOC_Os01g33050 | Os01g0514000 | - | Detail |
| CX1g000762 | 1:17,161,549-17,171,101 | + | C1H1g14994 | C2H1g15853 | LOC_Os01g33060 | Os01g0514300 | - | Detail |
| CX1g002835 | 1:17,174,267-17,175,388 | + | C1H1g01968 | C2H1g02122 | LOC_Os01g33070 | Os01g0514450 | - | Detail |
| CX1g003510 | 1:17,186,072-17,192,124 | + | C1H1g23037 | C2H1g28988 | LOC_Os01g33080 | Os01g0514600 | - | Detail |
| CX1g002745 | 1:17,200,497-17,203,032 | + | C1H1g14522 | C2H1g05248 | LOC_Os01g33090 | Os01g0514700 | - | Detail |
| CX1g001599 | 1:17,240,170-17,242,291 | - | C1H1g14011 | C2H1g29780 | LOC_Os01g34410 | Os01g0527900 | - | Detail |
| CX1g000632 | 1:17,252,968-17,257,063 | - | C1H1g13083 | C2H1g29427 | LOC_Os01g33230 | Os01g0516700 | - | Detail |
| CX1g003534 | 1:17,260,150-17,260,503 | + | - | C2H1g12851 | - | - | - | Detail |
| CX1g005992 | 1:17,261,226-17,276,897 | - | C1H1g03571 | C2H1g22414 | LOC_Os01g33260 | Os01g0516900 | - | Detail |
| CX1g001381 | 1:17,308,454-17,309,688 | - | C1H1g15043 | C2H1g19175 | LOC_Os01g33350 | Os01g0517800 | OsFl3 | Detail |