| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g05786 | 7:4,212,789-4,215,761 | - | C1H7g00026 | CX7g048929 | LOC_Os07g08750 | Os07g0185000 | - | Detail |
| C2H7g20869 | 7:4,217,714-4,222,053 | - | C1H7g02270 | CX7g050270 | LOC_Os07g08760 | Os07g0185200 | - | Detail |
| C2H7g07159 | 7:4,227,217-4,227,744 | - | - | CX7g046271 | LOC_Os07g08770 | Os07g0185300 | - | Detail |
| C2H7g09570 | 7:4,241,011-4,247,301 | + | C1H7g21233 | CX7g050362 | LOC_Os07g08790 | Os07g0185432 | - | Detail |
| C2H7g02745 | 7:4,255,191-4,262,713 | + | C1H7g04399 | CX7g049699 | LOC_Os07g08810 | Os07g0185700 | - | Detail |
| C2H7g29336 | 7:4,266,820-4,269,949 | + | C1H7g17793 | CX7g048108 | LOC_Os07g08820 | Os07g0185800 | - | Detail |
| C2H7g13139 | 7:4,277,748-4,277,984 | - | C1H7g13541 | CX3g028966 | - | Os07g0185900 | - | Detail |
| C2H7g30045 | 7:4,287,679-4,289,641 | - | C1H7g15110 | CX7g047579 | LOC_Os07g08840 | Os07g0186000 | TRXH, trxh, Trx-H, OsTRXh1, OsTrxh1, Os1, OsTrx23, RPP13-1 | Detail |
| C2H7g25400 | 7:4,304,929-4,307,445 | - | C1H7g16802 | CX7g046706 | LOC_Os07g08860 | Os07g0186200 | SDRLK-SIK2, SIK2, OsSIK2, YK14 | Detail |
| C2H7g00916 | 7:4,311,780-4,314,422 | + | C1H7g31770 | CX7g047241 | LOC_Os07g08880 | Os07g0186400 | OsSHL1 | Detail |
| C2H7g24863 | 7:4,321,609-4,324,329 | + | C1H7g06257 | CX7g047241 | LOC_Os07g08890 | Os07g0186500 | - | Detail |
| C2H7g24828 | 7:4,327,031-4,333,206 | + | C1H7g14544 | CX7g047294 | LOC_Os07g08950 | Os07g0187200 | OsD-LDH2 | Detail |
| C2H7g12614 | 7:4,333,892-4,336,525 | - | C1H7g26846 | CX7g049916 | LOC_Os07g08960 | Os07g0549800 | - | Detail |
| C2H7g29149 | 7:4,337,669-4,341,516 | - | C1H7g27888 | CX7g048853 | LOC_Os07g08970 | Os07g0187400 | - | Detail |
| C2H7g29227 | 7:4,345,945-4,350,142 | + | C1H7g28076 | CX7g047749 | LOC_Os07g09000 | Os07g0187700 | PHF1, OsPHF1, OsWD40-137, OsSEC12 | Detail |
| C2H7g04045 | 7:4,360,372-4,362,273 | + | - | CX7g048678 | LOC_Os07g09010 | Os07g0187900 | - | Detail |
| C2H7g16781 | 7:4,367,052-4,377,051 | - | C1H7g18469 | CX7g050137 | LOC_Os07g09020 | Os07g0188000 | - | Detail |
| C2H7g28352 | 7:4,388,179-4,390,738 | + | C1H7g07933 | CX7g048045 | LOC_Os07g09040 | Os07g0188233 | - | Detail |
| C2H7g22140 | 7:4,392,080-4,393,178 | + | C1H7g27796 | CX7g049512 | LOC_Os07g09040 | Os07g0188266 | - | Detail |
| C2H7g15428 | 7:4,396,177-4,399,976 | + | C1H7g22647 | CX7g048570 | LOC_Os07g09050 | Os07g0188700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026782 | 3:26,269,251-26,274,182 | + | C1H3g00070 | C2H3g05028 | LOC_Os03g49350 | Os03g0700400 | LOX-3 | Detail |
| CX3g025694 | 3:26,274,553-26,278,280 | - | C1H3g16785 | C2H3g15504 | LOC_Os03g49360 | Os03g0700500 | - | Detail |
| CX3g026204 | 3:26,288,487-26,294,325 | + | C1H3g28644 | C2H3g00658 | LOC_Os03g49380 | Os03g0700700 | - | Detail |
| CX3g025372 | 3:26,298,990-26,305,312 | + | C1H3g00971 | C2H3g05258 | LOC_Os03g49400 | Os03g0700800 | - | Detail |
| CX3g029939 | 3:26,310,511-26,318,710 | + | C1H3g06905 | C2H3g25047 | LOC_Os03g49420 | Os03g0701000 | - | Detail |
| CX3g025036 | 3:26,320,926-26,323,256 | - | C1H3g16586 | C2H3g16404 | LOC_Os03g49430 | Os03g0701100 | - | Detail |
| CX3g031052 | 3:26,324,459-26,327,398 | + | C1H3g02438 | C2H3g29777 | LOC_Os03g49440 | Os03g0701200 | - | Detail |
| CX3g025970 | 3:26,329,820-26,331,843 | + | C1H3g07329 | C2H3g12076 | LOC_Os03g49450 | Os03g0701300 | - | Detail |
| CX3g026197 | 3:26,332,922-26,337,915 | + | C1H3g07329 | C2H3g02417 | LOC_Os03g49464 | Os03g0701400 | - | Detail |
| CX3g030843 | 3:26,339,904-26,340,743 | - | - | - | LOC_Os03g49480 | Os03g0701500 | - | Detail |
| CX3g027768 | 3:26,343,235-26,346,571 | - | C1H3g23591 | C2H3g12750 | LOC_Os03g49485 | Os03g0701600 | - | Detail |
| CX3g031302 | 3:26,353,921-26,354,569 | - | - | - | - | - | - | Detail |
| CX3g028834 | 3:26,355,570-26,358,899 | - | C1H3g03877 | C2H3g06305 | LOC_Os03g49500 | Os03g0701700 | - | Detail |
| CX3g030270 | 3:26,366,325-26,371,791 | + | C1H3g05492 | C2H3g14249 | LOC_Os03g49510 | Os03g0701800 | - | Detail |
| CX3g025317 | 3:26,372,311-26,375,976 | - | C1H3g29237 | C2H3g17325 | LOC_Os03g49520 | Os03g0701900 | - | Detail |
| CX3g025945 | 3:26,378,317-26,378,568 | + | - | - | - | - | - | Detail |
| CX3g025207 | 3:26,379,432-26,379,680 | - | - | - | - | - | - | Detail |
| CX3g027123 | 3:26,380,472-26,380,741 | + | - | - | - | - | - | Detail |
| CX3g028635 | 3:26,382,384-26,383,859 | - | C1H3g26019 | C2H3g13892 | LOC_Os03g49524 | Os03g0702000 | - | Detail |
| CX3g029512 | 3:26,385,716-26,387,200 | - | C1H3g26019 | C2H3g13892 | LOC_Os03g49524 | Os03g0702000 | - | Detail |