| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g11255 | 5:19,342,606-19,344,167 | + | C2H5g14285 | CX5g039945 | LOC_Os05g40240 | Os05g0480800 | - | Detail |
| C1H5g24027 | 5:19,351,518-19,354,476 | + | C2H5g11353 | CX5g037040 | LOC_Os05g40260 | Os05g0481000 | - | Detail |
| C1H5g02182 | 5:19,361,852-19,371,211 | + | C2H5g07339 | CX5g038324 | LOC_Os05g40270 | Os05g0481100 | - | Detail |
| C1H5g03756 | 5:19,371,583-19,375,540 | - | C2H5g09907 | CX5g039343 | LOC_Os05g40280 | Os05g0481400 | - | Detail |
| C1H5g03902 | 5:19,387,314-19,390,883 | - | C2H5g20428 | CX5g038848 | LOC_Os05g40290 | Os05g0481500 | - | Detail |
| C1H5g10469 | 5:19,397,817-19,398,361 | + | C2H5g27797 | CX5g036753 | LOC_Os05g40300 | Os05g0481600 | - | Detail |
| C1H5g24805 | 5:19,401,091-19,403,618 | - | C2H5g06900 | CX5g037459 | LOC_Os05g40310 | Os05g0481700 | - | Detail |
| C1H5g08499 | 5:19,405,903-19,407,457 | + | C2H5g25296 | CX5g038701 | LOC_Os05g40320 | Os05g0481800 | - | Detail |
| C1H5g14646 | 5:19,410,985-19,413,294 | - | C2H5g16978 | CX5g037406 | LOC_Os05g40330 | Os05g0481900 | - | Detail |
| C1H5g20454 | 5:19,416,011-19,416,892 | - | C2H5g15740 | CX5g040861 | LOC_Os05g40360 | - | - | Detail |
| C1H5g22811 | 5:19,418,853-19,425,042 | + | C2H2g01315 | CX5g037195 | LOC_Os03g61860 | - | - | Detail |
| C1H5g07154 | 5:19,455,504-19,455,984 | + | C2H5g03648 | CX5g037663 | LOC_Os05g40384 | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| C1H5g08150 | 5:19,461,940-19,464,121 | + | C2H5g22897 | CX5g037663 | LOC_Os05g40384 | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| C1H5g11883 | 5:19,465,057-19,465,692 | + | C2H5g02533 | CX5g038624 | LOC_Os05g40400 | Os05g0482501 | - | Detail |
| C1H5g19898 | 5:19,474,299-19,474,571 | - | - | - | - | Os01g0817900 | - | Detail |
| C1H5g01703 | 5:19,474,390-19,478,928 | + | C2H5g19376 | CX5g040561 | LOC_Os05g40410 | Os05g0482600 | - | Detail |
| C1H5g12944 | 5:19,479,056-19,483,746 | - | C2H5g12661 | CX5g037367 | LOC_Os05g40420 | Os05g0482700 | - | Detail |
| C1H5g09268 | 5:19,543,083-19,544,643 | - | C2H5g26553 | CX5g039268 | LOC_Os05g40590 | Os05g0539300 | - | Detail |
| C1H5g23451 | 5:19,545,742-19,547,608 | - | C2H5g23995 | CX5g039268 | LOC_Os05g40610 | Os05g0539300 | - | Detail |
| C1H5g31019 | 5:19,548,410-19,549,771 | + | C2H5g16811 | CX5g039268 | LOC_Os05g40620 | Os05g0539300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026782 | 3:26,269,251-26,274,182 | + | C1H3g00070 | C2H3g05028 | LOC_Os03g49350 | Os03g0700400 | LOX-3 | Detail |
| CX3g025694 | 3:26,274,553-26,278,280 | - | C1H3g16785 | C2H3g15504 | LOC_Os03g49360 | Os03g0700500 | - | Detail |
| CX3g026204 | 3:26,288,487-26,294,325 | + | C1H3g28644 | C2H3g00658 | LOC_Os03g49380 | Os03g0700700 | - | Detail |
| CX3g025372 | 3:26,298,990-26,305,312 | + | C1H3g00971 | C2H3g05258 | LOC_Os03g49400 | Os03g0700800 | - | Detail |
| CX3g029939 | 3:26,310,511-26,318,710 | + | C1H3g06905 | C2H3g25047 | LOC_Os03g49420 | Os03g0701000 | - | Detail |
| CX3g025036 | 3:26,320,926-26,323,256 | - | C1H3g16586 | C2H3g16404 | LOC_Os03g49430 | Os03g0701100 | - | Detail |
| CX3g031052 | 3:26,324,459-26,327,398 | + | C1H3g02438 | C2H3g29777 | LOC_Os03g49440 | Os03g0701200 | - | Detail |
| CX3g025970 | 3:26,329,820-26,331,843 | + | C1H3g07329 | C2H3g12076 | LOC_Os03g49450 | Os03g0701300 | - | Detail |
| CX3g026197 | 3:26,332,922-26,337,915 | + | C1H3g07329 | C2H3g02417 | LOC_Os03g49464 | Os03g0701400 | - | Detail |
| CX3g030843 | 3:26,339,904-26,340,743 | - | - | - | LOC_Os03g49480 | Os03g0701500 | - | Detail |
| CX3g027768 | 3:26,343,235-26,346,571 | - | C1H3g23591 | C2H3g12750 | LOC_Os03g49485 | Os03g0701600 | - | Detail |
| CX3g031302 | 3:26,353,921-26,354,569 | - | - | - | - | - | - | Detail |
| CX3g028834 | 3:26,355,570-26,358,899 | - | C1H3g03877 | C2H3g06305 | LOC_Os03g49500 | Os03g0701700 | - | Detail |
| CX3g030270 | 3:26,366,325-26,371,791 | + | C1H3g05492 | C2H3g14249 | LOC_Os03g49510 | Os03g0701800 | - | Detail |
| CX3g025317 | 3:26,372,311-26,375,976 | - | C1H3g29237 | C2H3g17325 | LOC_Os03g49520 | Os03g0701900 | - | Detail |
| CX3g025945 | 3:26,378,317-26,378,568 | + | - | - | - | - | - | Detail |
| CX3g025207 | 3:26,379,432-26,379,680 | - | - | - | - | - | - | Detail |
| CX3g027123 | 3:26,380,472-26,380,741 | + | - | - | - | - | - | Detail |
| CX3g028635 | 3:26,382,384-26,383,859 | - | C1H3g26019 | C2H3g13892 | LOC_Os03g49524 | Os03g0702000 | - | Detail |
| CX3g029512 | 3:26,385,716-26,387,200 | - | C1H3g26019 | C2H3g13892 | LOC_Os03g49524 | Os03g0702000 | - | Detail |