| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g01547 | 5:106,399-109,185 | - | C2H5g11548 | CX5g038525 | LOC_Os05g01120 | Os05g0101600 | - | Detail |
| C1H5g21429 | 5:128,582-132,259 | + | C2H5g11343 | CX5g040553 | LOC_Os05g01190 | Os05g0102300 | - | Detail |
| C1H5g12210 | 5:133,279-134,049 | + | C2H5g29002 | CX5g038962 | LOC_Os05g01200 | Os05g0102400 | - | Detail |
| C1H5g24021 | 5:134,669-136,790 | - | C2H5g25831 | CX5g039033 | LOC_Os05g01210 | Os05g0102500 | - | Detail |
| C1H5g11428 | 5:140,057-144,954 | + | C2H5g09707 | CX5g037244 | LOC_Os05g01230 | Os05g0102600 | - | Detail |
| C1H5g05413 | 5:145,472-153,356 | - | C2H5g01721 | CX5g038484 | LOC_Os05g01240 | Os05g0102800 | - | Detail |
| C1H5g16359 | 5:163,068-165,978 | + | C2H5g05131 | CX5g040550 | LOC_Os05g01250 | Os05g0102900 | - | Detail |
| C1H5g27377 | 5:168,084-170,171 | - | C2H5g28008 | CX5g037761 | LOC_Os05g01256 | Os05g0103000 | - | Detail |
| C1H5g28308 | 5:171,065-173,451 | - | C2H5g14971 | CX5g038148 | LOC_Os05g01262 | Os05g0103100 | - | Detail |
| C1H5g30548 | 5:174,490-176,978 | + | C2H5g18349 | CX5g039900 | LOC_Os05g01270 | Os05g0103200 | - | Detail |
| C1H5g25959 | 5:192,316-196,149 | - | C2H5g25073 | CX5g040155 | LOC_Os05g01310 | Os05g0103600 | - | Detail |
| C1H5g00386 | 5:196,952-200,155 | - | C2H5g19367 | CX5g037279 | LOC_Os05g01320 | Os05g0103700 | - | Detail |
| C1H5g16700 | 5:202,479-203,950 | - | C2H5g05200 | CX5g037112 | LOC_Os05g01330 | Os05g0103800 | - | Detail |
| C1H5g29606 | 5:207,204-211,349 | + | C2H5g18611 | CX5g040057 | LOC_Os05g01350 | Os05g0104000 | - | Detail |
| C1H5g00400 | 5:212,621-220,033 | + | C2H5g24643 | CX5g040235 | LOC_Os05g01360 | Os05g0104100 | - | Detail |
| C1H5g15746 | 5:220,707-221,741 | + | C2H5g21529 | CX5g038227 | LOC_Os05g01370 | Os05g0104150 | PGIP2, Ospgip2, pgip2, OsPGIP2 | Detail |
| C1H5g23583 | 5:223,602-224,531 | + | C2H5g16478 | CX5g038227 | LOC_Os05g01380 | Os05g0104200 | PGIP1, Ospgip1, pgip1, OsPGIP1 | Detail |
| C1H5g17625 | 5:225,013-226,041 | + | C2H5g22812 | CX5g038227 | LOC_Os05g01430 | Os05g0104600 | PGIP3, Ospgip3, pgip3, OsPGIP3 | Detail |
| C1H5g17368 | 5:227,835-233,750 | + | C2H5g01578 | CX5g038022 | LOC_Os05g01440 | Os05g0104650 | - | Detail |
| C1H5g26046 | 5:236,309-238,447 | - | C2H5g13110 | CX5g039427 | LOC_Os05g01450 | Os05g0104800 | EIF3F, eIF-3f, OseIF3f | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026782 | 3:26,269,251-26,274,182 | + | C1H3g00070 | C2H3g05028 | LOC_Os03g49350 | Os03g0700400 | LOX-3 | Detail |
| CX3g025694 | 3:26,274,553-26,278,280 | - | C1H3g16785 | C2H3g15504 | LOC_Os03g49360 | Os03g0700500 | - | Detail |
| CX3g026204 | 3:26,288,487-26,294,325 | + | C1H3g28644 | C2H3g00658 | LOC_Os03g49380 | Os03g0700700 | - | Detail |
| CX3g025372 | 3:26,298,990-26,305,312 | + | C1H3g00971 | C2H3g05258 | LOC_Os03g49400 | Os03g0700800 | - | Detail |
| CX3g029939 | 3:26,310,511-26,318,710 | + | C1H3g06905 | C2H3g25047 | LOC_Os03g49420 | Os03g0701000 | - | Detail |
| CX3g025036 | 3:26,320,926-26,323,256 | - | C1H3g16586 | C2H3g16404 | LOC_Os03g49430 | Os03g0701100 | - | Detail |
| CX3g031052 | 3:26,324,459-26,327,398 | + | C1H3g02438 | C2H3g29777 | LOC_Os03g49440 | Os03g0701200 | - | Detail |
| CX3g025970 | 3:26,329,820-26,331,843 | + | C1H3g07329 | C2H3g12076 | LOC_Os03g49450 | Os03g0701300 | - | Detail |
| CX3g026197 | 3:26,332,922-26,337,915 | + | C1H3g07329 | C2H3g02417 | LOC_Os03g49464 | Os03g0701400 | - | Detail |
| CX3g030843 | 3:26,339,904-26,340,743 | - | - | - | LOC_Os03g49480 | Os03g0701500 | - | Detail |
| CX3g027768 | 3:26,343,235-26,346,571 | - | C1H3g23591 | C2H3g12750 | LOC_Os03g49485 | Os03g0701600 | - | Detail |
| CX3g031302 | 3:26,353,921-26,354,569 | - | - | - | - | - | - | Detail |
| CX3g028834 | 3:26,355,570-26,358,899 | - | C1H3g03877 | C2H3g06305 | LOC_Os03g49500 | Os03g0701700 | - | Detail |
| CX3g030270 | 3:26,366,325-26,371,791 | + | C1H3g05492 | C2H3g14249 | LOC_Os03g49510 | Os03g0701800 | - | Detail |
| CX3g025317 | 3:26,372,311-26,375,976 | - | C1H3g29237 | C2H3g17325 | LOC_Os03g49520 | Os03g0701900 | - | Detail |
| CX3g025945 | 3:26,378,317-26,378,568 | + | - | - | - | - | - | Detail |
| CX3g025207 | 3:26,379,432-26,379,680 | - | - | - | - | - | - | Detail |
| CX3g027123 | 3:26,380,472-26,380,741 | + | - | - | - | - | - | Detail |
| CX3g028635 | 3:26,382,384-26,383,859 | - | C1H3g26019 | C2H3g13892 | LOC_Os03g49524 | Os03g0702000 | - | Detail |
| CX3g029512 | 3:26,385,716-26,387,200 | - | C1H3g26019 | C2H3g13892 | LOC_Os03g49524 | Os03g0702000 | - | Detail |