| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g02245 | 3:7,522,799-7,525,665 | + | C1H3g09649 | CX3g029180 | LOC_Os03g15560 | Os03g0262100 | - | Detail |
| C2H3g27971 | 3:7,526,761-7,531,054 | - | C1H3g05616 | CX3g026565 | LOC_Os03g15570 | Os03g0262200 | - | Detail |
| C2H3g16143 | 3:7,535,546-7,549,342 | - | C1H3g16946 | CX3g027558 | LOC_Os03g15580 | Os03g0262300 | - | Detail |
| C2H3g26303 | 3:7,550,865-7,553,322 | - | C1H3g00248 | CX3g026755 | LOC_Os03g15590 | Os03g0262400 | - | Detail |
| C2H3g04568 | 3:7,559,791-7,560,498 | + | C1H3g17162 | CX3g029077 | LOC_Os03g15630 | Os03g0262700 | - | Detail |
| C2H3g27525 | 3:7,565,251-7,570,656 | + | C1H3g28720 | CX3g031108 | LOC_Os03g15650 | Os03g0262900 | GLUP6/GEF, OsVPS9A, VPS9a, GPA2/VPS9a, GPA2, GLUP6 | Detail |
| C2H3g13896 | 3:7,571,755-7,572,516 | - | C1H3g05394 | CX3g028305 | LOC_Os03g15660 | Os03g0263000 | - | Detail |
| C2H3g08920 | 3:7,588,969-7,590,720 | + | C1H3g03212 | CX3g027760 | LOC_Os03g15680 | Os03g0263300 | NSP2, Os NSP2, NSP2 | Detail |
| C2H3g28518 | 3:7,593,977-7,597,874 | + | C1H3g04873 | CX3g028003 | LOC_Os03g15690 | Os03g0263400 | - | Detail |
| C2H3g08217 | 3:7,598,202-7,600,903 | - | C1H3g22836 | CX3g030022 | LOC_Os03g15700 | Os03g0263500 | - | Detail |
| C2H3g20978 | 3:7,602,409-7,603,988 | - | C1H3g14620 | CX3g031268 | LOC_Os03g15710 | Os03g0263600 | OsSTRL2 | Detail |
| C2H3g30231 | 3:7,605,724-7,608,200 | + | C1H3g20320 | CX3g028260 | LOC_Os03g15720 | Os03g0263700 | - | Detail |
| C2H3g12908 | 3:7,611,168-7,613,824 | + | C1H3g15450 | CX3g027745 | LOC_Os03g15730 | Os03g0263800 | - | Detail |
| C2H3g16128 | 3:7,617,057-7,619,603 | + | C1H3g29175 | CX3g026739 | LOC_Os03g15740 | Os03g0263900 | - | Detail |
| C2H3g07359 | 3:7,621,932-7,625,771 | - | C1H3g24070 | CX3g027842 | LOC_Os03g15750 | Os03g0264000 | - | Detail |
| C2H3g24590 | 3:7,633,149-7,637,166 | + | C1H3g19617 | CX3g030764 | LOC_Os03g15770 | Os03g0264300 | - | Detail |
| C2H3g11898 | 3:7,637,698-7,642,403 | - | C1H3g02519 | CX3g029488 | LOC_Os03g15780 | Os03g0264400 | - | Detail |
| C2H3g27599 | 3:7,646,930-7,648,300 | - | C1H3g09016 | CX3g027532 | LOC_Os03g15790 | Os03g0264600 | - | Detail |
| C2H3g02876 | 3:7,651,843-7,653,288 | - | C1H3g19306 | CX3g025411 | LOC_Os03g15800 | Os03g0264700 | - | Detail |
| C2H3g07031 | 3:7,653,862-7,661,556 | - | C1H3g00653 | CX3g030279 | LOC_Os03g15810 | Os03g0264800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031322 | 3:26,084,724-26,094,495 | - | C1H3g15935 | C2H3g02669 | LOC_Os03g48940 | Os03g0695700 | - | Detail |
| CX3g027930 | 3:26,098,262-26,099,185 | + | C1H3g18763 | C2H3g25659 | LOC_Os03g48950 | Os03g0696000 | - | Detail |
| CX3g028950 | 3:26,103,709-26,104,041 | - | - | - | LOC_Os03g48960 | Os03g0696150 | - | Detail |
| CX3g027372 | 3:26,107,181-26,108,336 | - | - | - | - | Os03g0564800 | - | Detail |
| CX3g026991 | 3:26,115,045-26,117,450 | + | C1H3g17032 | C2H3g00519 | LOC_Os03g48970 | Os03g0696300 | - | Detail |
| CX3g031047 | 3:26,123,616-26,130,757 | + | C1H3g13231 | C2H3g19190 | LOC_Os03g59910 | Os03g0565900 | - | Detail |
| CX3g029768 | 3:26,139,547-26,142,268 | + | C1H3g02064 | C2H3g17803 | LOC_Os03g49050 | Os03g0109300 | - | Detail |
| CX3g028722 | 3:26,150,217-26,153,646 | + | C1H3g16785 | C2H3g15504 | LOC_Os03g49126 | Os03g0697833 | - | Detail |
| CX3g029661 | 3:26,156,745-26,161,929 | - | C1H3g27645 | C2H3g27379 | LOC_Os03g49140 | Os03g0698350 | - | Detail |
| CX3g030702 | 3:26,165,603-26,168,784 | + | C1H3g28768 | C2H3g20960 | LOC_Os03g49150 | Os03g0193075 | - | Detail |
| CX3g025989 | 3:26,177,825-26,180,077 | + | C1H3g04379 | C2H3g00073 | LOC_Os03g49170 | Os03g0698800 | - | Detail |
| CX3g029194 | 3:26,182,389-26,184,866 | - | C1H3g08733 | C2H3g03385 | LOC_Os03g49180 | Os03g0698900 | - | Detail |
| CX3g025006 | 3:26,188,535-26,189,041 | - | - | - | LOC_Os03g49190 | Os03g0699000 | OLE18 | Detail |
| CX3g027765 | 3:26,190,865-26,194,045 | - | C1H3g14380 | C2H3g06339 | LOC_Os03g49200 | Os03g0699100 | - | Detail |
| CX3g025779 | 3:26,195,920-26,201,331 | + | C1H3g06128 | C2H3g19400 | LOC_Os03g49210 | Os03g0699200 | - | Detail |
| CX3g029958 | 3:26,202,053-26,205,041 | + | C1H3g23737 | C2H3g05406 | LOC_Os03g49220 | Os03g0699300 | - | Detail |
| CX3g028209 | 3:26,206,189-26,208,773 | - | C1H3g16011 | C2H3g18347 | LOC_Os03g49230 | Os03g0699400 | - | Detail |
| CX3g029586 | 3:26,211,886-26,213,378 | + | C1H3g30535 | C2H3g00103 | LOC_Os03g49250 | Os03g0699600 | - | Detail |
| CX3g027914 | 3:26,215,321-26,219,150 | + | C1H3g05707 | C2H3g17436 | LOC_Os03g49260 | Os03g0699700 | Osr9-LOX1 | Detail |
| CX3g029272 | 3:26,263,845-26,264,288 | + | C1H5g12553 | C2H5g24320 | - | - | - | Detail |