| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g20992 | 6:20,786,978-20,788,881 | + | C1H6g05226 | CX6g044623 | LOC_Os06g39906 | Os06g0601000 | - | Detail |
| C2H6g28120 | 6:20,804,013-20,806,774 | + | C1H6g03363 | CX6g042659 | LOC_Os06g39960 | Os06g0601500 | OsbZIP48, OsHY5L2 | Detail |
| C2H6g17237 | 6:20,807,903-20,811,157 | + | C1H6g30468 | CX6g042583 | LOC_Os06g39970 | Os06g0601600 | OsCESA11 | Detail |
| C2H6g29039 | 6:20,821,571-20,826,537 | + | C1H6g18591 | CX6g044674 | LOC_Os06g40020 | Os06g0602400 | OsRH52A | Detail |
| C2H6g11572 | 6:20,841,490-20,843,038 | + | C1H6g01432 | CX6g045252 | LOC_Os06g40040 | Os06g0602600 | - | Detail |
| C2H6g05068 | 6:20,843,594-20,847,246 | - | C1H6g22569 | CX6g041818 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| C2H6g14435 | 6:20,862,399-20,866,430 | + | C1H6g14736 | CX6g042177 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| C2H6g04094 | 6:20,867,690-20,870,961 | - | C1H6g19546 | CX6g041181 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| C2H6g04563 | 6:20,873,487-20,876,999 | - | C1H6g00043 | CX6g043114 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| C2H6g18680 | 6:20,895,801-20,899,841 | - | C1H6g11187 | CX6g043946 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| C2H6g21981 | 6:20,916,404-20,917,475 | - | C1H6g05477 | CX6g044688 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| C2H6g11228 | 6:20,925,550-20,928,685 | - | C1H6g20423 | CX6g045934 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| C2H6g10259 | 6:20,936,778-20,938,125 | + | - | - | - | - | - | Detail |
| C2H6g26456 | 6:20,939,165-20,942,144 | + | C1H6g10180 | CX6g045594 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| C2H6g06437 | 6:20,946,189-20,949,815 | + | C1H6g27795 | CX6g041305 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| C2H6g13702 | 6:20,952,820-20,956,957 | + | C1H6g25357 | CX6g042132 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| C2H6g02651 | 6:20,967,982-20,968,696 | + | C1H6g04884 | CX6g044895 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| C2H6g13160 | 6:20,976,308-20,977,652 | - | C1H6g20614 | CX6g045437 | LOC_Os06g40220 | - | - | Detail |
| C2H6g05081 | 6:20,988,280-20,988,522 | + | C1H6g13328 | CX6g045873 | LOC_Os06g40320 | - | - | Detail |
| C2H6g19267 | 6:21,013,433-21,015,541 | - | C1H6g27028 | CX6g045451 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031322 | 3:26,084,724-26,094,495 | - | C1H3g15935 | C2H3g02669 | LOC_Os03g48940 | Os03g0695700 | - | Detail |
| CX3g027930 | 3:26,098,262-26,099,185 | + | C1H3g18763 | C2H3g25659 | LOC_Os03g48950 | Os03g0696000 | - | Detail |
| CX3g028950 | 3:26,103,709-26,104,041 | - | - | - | LOC_Os03g48960 | Os03g0696150 | - | Detail |
| CX3g027372 | 3:26,107,181-26,108,336 | - | - | - | - | Os03g0564800 | - | Detail |
| CX3g026991 | 3:26,115,045-26,117,450 | + | C1H3g17032 | C2H3g00519 | LOC_Os03g48970 | Os03g0696300 | - | Detail |
| CX3g031047 | 3:26,123,616-26,130,757 | + | C1H3g13231 | C2H3g19190 | LOC_Os03g59910 | Os03g0565900 | - | Detail |
| CX3g029768 | 3:26,139,547-26,142,268 | + | C1H3g02064 | C2H3g17803 | LOC_Os03g49050 | Os03g0109300 | - | Detail |
| CX3g028722 | 3:26,150,217-26,153,646 | + | C1H3g16785 | C2H3g15504 | LOC_Os03g49126 | Os03g0697833 | - | Detail |
| CX3g029661 | 3:26,156,745-26,161,929 | - | C1H3g27645 | C2H3g27379 | LOC_Os03g49140 | Os03g0698350 | - | Detail |
| CX3g030702 | 3:26,165,603-26,168,784 | + | C1H3g28768 | C2H3g20960 | LOC_Os03g49150 | Os03g0193075 | - | Detail |
| CX3g025989 | 3:26,177,825-26,180,077 | + | C1H3g04379 | C2H3g00073 | LOC_Os03g49170 | Os03g0698800 | - | Detail |
| CX3g029194 | 3:26,182,389-26,184,866 | - | C1H3g08733 | C2H3g03385 | LOC_Os03g49180 | Os03g0698900 | - | Detail |
| CX3g025006 | 3:26,188,535-26,189,041 | - | - | - | LOC_Os03g49190 | Os03g0699000 | OLE18 | Detail |
| CX3g027765 | 3:26,190,865-26,194,045 | - | C1H3g14380 | C2H3g06339 | LOC_Os03g49200 | Os03g0699100 | - | Detail |
| CX3g025779 | 3:26,195,920-26,201,331 | + | C1H3g06128 | C2H3g19400 | LOC_Os03g49210 | Os03g0699200 | - | Detail |
| CX3g029958 | 3:26,202,053-26,205,041 | + | C1H3g23737 | C2H3g05406 | LOC_Os03g49220 | Os03g0699300 | - | Detail |
| CX3g028209 | 3:26,206,189-26,208,773 | - | C1H3g16011 | C2H3g18347 | LOC_Os03g49230 | Os03g0699400 | - | Detail |
| CX3g029586 | 3:26,211,886-26,213,378 | + | C1H3g30535 | C2H3g00103 | LOC_Os03g49250 | Os03g0699600 | - | Detail |
| CX3g027914 | 3:26,215,321-26,219,150 | + | C1H3g05707 | C2H3g17436 | LOC_Os03g49260 | Os03g0699700 | Osr9-LOX1 | Detail |
| CX3g029272 | 3:26,263,845-26,264,288 | + | C1H5g12553 | C2H5g24320 | - | - | - | Detail |