| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g00884 | 2:3,812,648-3,816,106 | + | C2H2g11136 | CX2g022017 | LOC_Os02g08260 | Os02g0179100 | - | Detail |
| C1H2g27338 | 2:3,818,986-3,821,778 | - | C2H2g22090 | CX2g024480 | LOC_Os02g08270 | Os02g0179200 | - | Detail |
| C1H2g15683 | 2:3,827,546-3,832,508 | + | C2H2g18129 | CX2g023864 | LOC_Os02g08300 | Os02g0179300 | - | Detail |
| C1H2g09345 | 2:3,832,904-3,835,074 | - | C2H2g12176 | CX2g022399 | LOC_Os02g08310 | Os02g0179400 | - | Detail |
| C1H2g30953 | 2:3,841,510-3,845,473 | + | C2H2g24288 | CX2g020585 | LOC_Os02g08320 | Os02g0179500 | - | Detail |
| C1H2g15298 | 2:3,846,555-3,848,540 | - | - | CX2g020007 | LOC_Os02g08330 | Os02g0179600 | - | Detail |
| C1H2g23751 | 2:3,850,541-3,855,785 | - | C2H2g01634 | CX2g020510 | LOC_Os02g08350 | Os02g0179800 | - | Detail |
| C1H2g17009 | 2:3,857,894-3,866,840 | + | C2H2g05800 | CX2g023636 | LOC_Os02g08360 | Os02g0179900 | - | Detail |
| C1H2g04017 | 2:3,868,337-3,872,818 | + | C2H2g08895 | CX2g019636 | LOC_Os02g08364 | Os02g0180000 | - | Detail |
| C1H2g13865 | 2:3,873,173-3,875,364 | - | C2H2g28931 | CX2g022824 | LOC_Os02g08370 | Os02g0180100 | - | Detail |
| C1H2g02146 | 2:3,877,404-3,880,606 | + | C2H2g25419 | CX2g023398 | LOC_Os02g08380 | Os02g0180200 | LA2, LTA1 | Detail |
| C1H2g01164 | 2:3,896,213-3,897,816 | + | C2H2g28103 | CX2g022601 | LOC_Os02g08400 | Os02g0180400 | HHC2 | Detail |
| C1H2g08033 | 2:3,901,028-3,903,545 | - | C2H2g19969 | CX2g022893 | LOC_Os02g08410 | Os02g0180500 | - | Detail |
| C1H2g12941 | 2:3,907,813-3,910,813 | + | C2H2g21393 | CX2g022487 | LOC_Os02g08420 | Os02g0180700 | OsCCR21 | Detail |
| C1H2g19399 | 2:3,963,157-3,965,142 | + | C2H2g08597 | CX2g020326 | LOC_Os02g08440 | Os02g0181300 | WRKY71, OsWRKY71 | Detail |
| C1H2g31251 | 2:3,977,406-3,978,517 | + | C2H2g13400 | CX2g018962 | LOC_Os02g08470 | Os02g0181700 | - | Detail |
| C1H2g13602 | 2:3,981,671-3,985,149 | + | C2H2g22677 | CX2g021549 | LOC_Os02g08480 | Os02g0181800 | - | Detail |
| C1H2g14304 | 2:3,986,063-3,991,419 | - | C2H2g06559 | CX2g021572 | LOC_Os02g08490 | Os02g0181900 | - | Detail |
| C1H2g19533 | 2:3,992,506-3,997,145 | - | C2H2g18423 | CX2g020537 | LOC_Os02g08500 | Os02g0182100 | RR24, OsRR24, Rrb2, Orr4, OsRR17, OsRRB2, DLC1 | Detail |
| C1H2g06188 | 2:4,014,849-4,015,442 | - | C2H2g14863 | CX2g019859 | LOC_Os02g08510 | Os02g0182300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031322 | 3:26,084,724-26,094,495 | - | C1H3g15935 | C2H3g02669 | LOC_Os03g48940 | Os03g0695700 | - | Detail |
| CX3g027930 | 3:26,098,262-26,099,185 | + | C1H3g18763 | C2H3g25659 | LOC_Os03g48950 | Os03g0696000 | - | Detail |
| CX3g028950 | 3:26,103,709-26,104,041 | - | - | - | LOC_Os03g48960 | Os03g0696150 | - | Detail |
| CX3g027372 | 3:26,107,181-26,108,336 | - | - | - | - | Os03g0564800 | - | Detail |
| CX3g026991 | 3:26,115,045-26,117,450 | + | C1H3g17032 | C2H3g00519 | LOC_Os03g48970 | Os03g0696300 | - | Detail |
| CX3g031047 | 3:26,123,616-26,130,757 | + | C1H3g13231 | C2H3g19190 | LOC_Os03g59910 | Os03g0565900 | - | Detail |
| CX3g029768 | 3:26,139,547-26,142,268 | + | C1H3g02064 | C2H3g17803 | LOC_Os03g49050 | Os03g0109300 | - | Detail |
| CX3g028722 | 3:26,150,217-26,153,646 | + | C1H3g16785 | C2H3g15504 | LOC_Os03g49126 | Os03g0697833 | - | Detail |
| CX3g029661 | 3:26,156,745-26,161,929 | - | C1H3g27645 | C2H3g27379 | LOC_Os03g49140 | Os03g0698350 | - | Detail |
| CX3g030702 | 3:26,165,603-26,168,784 | + | C1H3g28768 | C2H3g20960 | LOC_Os03g49150 | Os03g0193075 | - | Detail |
| CX3g025989 | 3:26,177,825-26,180,077 | + | C1H3g04379 | C2H3g00073 | LOC_Os03g49170 | Os03g0698800 | - | Detail |
| CX3g029194 | 3:26,182,389-26,184,866 | - | C1H3g08733 | C2H3g03385 | LOC_Os03g49180 | Os03g0698900 | - | Detail |
| CX3g025006 | 3:26,188,535-26,189,041 | - | - | - | LOC_Os03g49190 | Os03g0699000 | OLE18 | Detail |
| CX3g027765 | 3:26,190,865-26,194,045 | - | C1H3g14380 | C2H3g06339 | LOC_Os03g49200 | Os03g0699100 | - | Detail |
| CX3g025779 | 3:26,195,920-26,201,331 | + | C1H3g06128 | C2H3g19400 | LOC_Os03g49210 | Os03g0699200 | - | Detail |
| CX3g029958 | 3:26,202,053-26,205,041 | + | C1H3g23737 | C2H3g05406 | LOC_Os03g49220 | Os03g0699300 | - | Detail |
| CX3g028209 | 3:26,206,189-26,208,773 | - | C1H3g16011 | C2H3g18347 | LOC_Os03g49230 | Os03g0699400 | - | Detail |
| CX3g029586 | 3:26,211,886-26,213,378 | + | C1H3g30535 | C2H3g00103 | LOC_Os03g49250 | Os03g0699600 | - | Detail |
| CX3g027914 | 3:26,215,321-26,219,150 | + | C1H3g05707 | C2H3g17436 | LOC_Os03g49260 | Os03g0699700 | Osr9-LOX1 | Detail |
| CX3g029272 | 3:26,263,845-26,264,288 | + | C1H5g12553 | C2H5g24320 | - | - | - | Detail |