| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g25430 | 6:10,493,018-10,497,454 | + | C2H6g10392 | CX6g043534 | LOC_Os06g20370 | Os06g0308300 | - | Detail |
| C1H6g27488 | 6:10,498,385-10,501,339 | - | C2H6g19307 | CX6g041373 | LOC_Os06g20354 | Os06g0308200 | - | Detail |
| C1H6g28578 | 6:10,512,565-10,515,725 | + | C2H6g01288 | CX6g041682 | LOC_Os06g20340 | Os06g0308100 | OsIBR5 | Detail |
| C1H6g26940 | 6:10,519,629-10,524,709 | - | C2H6g01883 | CX6g045311 | LOC_Os06g20320 | Os06g0308000 | - | Detail |
| C1H6g13182 | 6:10,527,602-10,531,668 | + | C2H6g11447 | CX6g044269 | LOC_Os06g20310 | Os06g0307900 | - | Detail |
| C1H6g29858 | 6:10,587,771-10,590,287 | - | C2H6g28781 | CX6g044784 | LOC_Os06g21950 | Os06g0325200 | PT10, OsPT10, PHT1-10, OsPht1;10 | Detail |
| C1H6g01775 | 6:10,597,261-10,602,153 | + | C2H6g27697 | CX6g041742 | LOC_Os06g21980 | Os06g0325500 | - | Detail |
| C1H6g12794 | 6:10,620,840-10,625,949 | - | C2H6g27491 | CX6g044903 | LOC_Os06g22030 | Os06g0326000 | OsAHL12 | Detail |
| C1H6g13140 | 6:10,651,118-10,657,433 | + | C2H6g18434 | CX6g042848 | LOC_Os06g22060 | Os06g0326400 | OsPFP1α2 | Detail |
| C1H6g10998 | 6:10,658,418-10,660,638 | + | C2H6g17401 | CX6g043795 | LOC_Os06g22070 | Os06g0326500 | - | Detail |
| C1H6g11567 | 6:10,666,852-10,669,123 | + | C2H6g22880 | CX6g041382 | LOC_Os06g22080 | Os06g0326700 | - | Detail |
| C1H6g20428 | 6:10,704,765-10,709,032 | - | C2H6g10187 | CX6g045562 | LOC_Os06g22140 | Os02g0713400 | OsNTRB | Detail |
| C1H6g13807 | 6:10,735,850-10,736,131 | + | C2H6g30291 | - | - | - | - | Detail |
| C1H6g13067 | 6:10,740,754-10,741,820 | + | - | - | - | - | - | Detail |
| C1H6g28465 | 6:10,756,427-10,756,931 | + | C2H6g08334 | - | - | Os06g0328200 | - | Detail |
| C1H6g18215 | 6:10,771,495-10,774,182 | + | C2H6g23875 | CX6g043389 | LOC_Os06g22290 | Os06g0328400 | - | Detail |
| C1H6g23568 | 6:10,788,419-10,792,101 | + | C2H6g15314 | CX6g043040 | LOC_Os06g22330 | Os06g0328800 | - | Detail |
| C1H6g00062 | 6:10,793,154-10,794,698 | - | C2H6g28071 | CX6g041178 | LOC_Os06g22340 | Os06g0497350 | - | Detail |
| C1H6g22415 | 6:10,879,725-10,881,654 | + | C2H6g20672 | CX6g043603 | LOC_Os06g22440 | Os06g0329900 | - | Detail |
| C1H6g26812 | 6:10,895,257-10,898,031 | - | C2H6g18800 | CX6g045518 | LOC_Os06g30430 | Os06g0330100 | Pid3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025253 | 3:25,734,510-25,739,499 | + | C1H3g21570 | C2H3g05160 | LOC_Os03g48270 | Os03g0688300 | CDPK9, OsCDPK9, OsCPK9 | Detail |
| CX3g026283 | 3:25,740,077-25,740,760 | + | C1H3g31647 | C2H3g13078 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| CX3g031082 | 3:25,743,918-25,744,328 | + | - | - | LOC_Os03g48904 | - | - | Detail |
| CX3g026788 | 3:25,752,281-25,752,487 | + | - | - | - | - | - | Detail |
| CX3g027485 | 3:25,754,749-25,761,420 | + | C1H3g15303 | C2H3g19979 | LOC_Os03g48300 | Os03g0689100 | - | Detail |
| CX3g028236 | 3:25,772,096-25,782,541 | + | C1H3g15303 | C2H3g19979 | LOC_Os03g48300 | Os03g0689100 | - | Detail |
| CX3g027452 | 3:25,790,461-25,797,243 | + | C1H3g28879 | C2H3g24844 | LOC_Os03g48310 | Os03g0689300 | - | Detail |
| CX3g026383 | 3:25,799,012-25,802,764 | - | C1H3g09435 | C2H3g06110 | LOC_Os03g48380 | Os03g0689900 | - | Detail |
| CX3g027552 | 3:25,804,611-25,806,904 | + | C1H3g04287 | C2H3g14932 | LOC_Os03g48390 | Os03g0690000 | - | Detail |
| CX3g027293 | 3:25,826,206-25,826,373 | + | - | - | - | - | - | Detail |
| CX3g028461 | 3:25,834,284-25,834,632 | - | - | - | - | Os01g0709100 | - | Detail |
| CX3g030755 | 3:25,837,290-25,837,649 | - | - | - | - | - | - | Detail |
| CX3g030442 | 3:25,840,017-25,841,117 | + | C1H3g05611 | C2H3g05774 | LOC_Os03g48430 | Os03g0690500 | - | Detail |
| CX3g028707 | 3:25,852,255-25,853,862 | - | C1H3g28354 | C2H3g03020 | LOC_Os03g48450 | Os03g0690600 | - | Detail |
| CX3g027625 | 3:25,893,263-25,895,618 | - | C1H3g11606 | C2H3g25812 | LOC_Os03g48480 | Os03g0691400 | - | Detail |
| CX3g027541 | 3:25,902,368-25,905,901 | + | C1H3g28504 | C2H3g09671 | LOC_Os03g48490 | Os03g0691500 | - | Detail |
| CX3g028404 | 3:25,910,697-25,910,999 | + | C1H10g24741 | C2H1g05458 | - | - | - | Detail |
| CX3g025878 | 3:25,919,893-25,925,486 | + | C1H3g22244 | C2H3g25810 | LOC_Os03g48540 | Os03g0691800 | OsHIPL1 | Detail |
| CX3g028675 | 3:25,928,882-25,932,030 | + | C1H3g29365 | C2H3g04588 | LOC_Os03g48560 | Os03g0692000 | - | Detail |
| CX3g029610 | 3:25,938,572-25,938,943 | - | C1H3g22267 | C2H3g07015 | LOC_Os03g48570 | Os03g0692100 | - | Detail |