| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g28297 | 2:15,133,154-15,138,781 | - | C1H2g09069 | CX2g021428 | LOC_Os02g26400 | Os02g0462300 | - | Detail |
| C2H2g28912 | 2:15,143,193-15,144,942 | + | - | - | LOC_Os02g26404 | - | - | Detail |
| C2H2g04148 | 2:15,146,356-15,147,300 | + | C1H2g21982 | CX2g022930 | LOC_Os02g26430 | Os02g0462800 | WRKY42, OsWRKY42 | Detail |
| C2H2g20091 | 2:15,148,762-15,152,117 | + | C1H2g26806 | CX2g022979 | LOC_Os02g26440 | Os02g0462900 | - | Detail |
| C2H2g05390 | 2:15,180,722-15,180,973 | - | C1H2g18666 | - | LOC_Os02g26470 | Os02g0463401 | - | Detail |
| C2H2g12721 | 2:15,186,279-15,193,701 | - | C1H2g19353 | CX2g019545 | LOC_Os02g26480 | Os02g0463500 | - | Detail |
| C2H2g18685 | 2:15,210,840-15,215,209 | + | C1H2g26039 | CX2g022576 | LOC_Os02g26560 | Os02g0464500 | - | Detail |
| C2H2g05215 | 2:15,220,478-15,224,187 | - | C1H2g02830 | CX2g020584 | LOC_Os02g26600 | Os02g0464900 | - | Detail |
| C2H2g20421 | 2:15,240,926-15,247,245 | - | C1H2g24229 | CX2g024852 | LOC_Os02g26650 | Os02g0465400 | OsDHCR7 | Detail |
| C2H2g06691 | 2:15,269,481-15,273,721 | - | C1H2g25809 | CX2g022338 | LOC_Os02g26660 | Os02g0465500 | - | Detail |
| C2H2g12733 | 2:15,286,470-15,289,692 | - | C1H2g20670 | CX2g019150 | LOC_Os02g26700 | Os02g0465900 | OsARP, OsCTP | Detail |
| C2H2g15284 | 2:15,340,290-15,342,318 | - | C1H2g16591 | CX2g022703 | LOC_Os02g26770 | Os02g0467600 | - | Detail |
| C2H2g11442 | 2:15,347,090-15,349,097 | + | C1H2g27142 | CX2g020093 | LOC_Os02g26810 | Os02g0467600 | - | Detail |
| C2H2g03170 | 2:15,353,074-15,354,960 | + | C1H2g15767 | CX2g019894 | LOC_Os02g26814 | Os02g0467700 | - | Detail |
| C2H2g24861 | 2:15,367,569-15,370,994 | - | C1H2g10068 | CX2g023894 | LOC_Os02g26850 | Os02g0468200 | - | Detail |
| C2H2g01661 | 2:15,375,621-15,379,896 | + | C1H2g09034 | CX2g021964 | LOC_Os02g26860 | Os02g0468400 | - | Detail |
| C2H2g06654 | 2:15,419,188-15,423,575 | - | C1H2g08635 | CX2g020394 | LOC_Os02g26940 | Os02g0468800 | - | Detail |
| C2H2g29193 | 2:15,425,768-15,426,464 | - | C1H2g07044 | CX2g019451 | LOC_Os02g26950 | Os02g0468900 | - | Detail |
| C2H2g09996 | 2:15,429,937-15,430,692 | + | C1H2g28525 | CX2g024051 | LOC_Os02g26960 | Os02g0469000 | - | Detail |
| C2H2g27914 | 2:15,433,745-15,456,142 | + | C1H2g22501 | CX2g021400 | LOC_Os02g26984 | Os02g0469200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029806 | 3:25,566,870-25,572,054 | - | C1H3g09827 | C2H3g10030 | LOC_Os03g47980 | Os03g0684100 | - | Detail |
| CX3g027899 | 3:25,573,178-25,575,925 | + | C1H3g13222 | C2H3g27014 | LOC_Os03g47990 | Os03g0684300 | - | Detail |
| CX3g029805 | 3:25,577,424-25,583,431 | + | C1H3g18256 | C2H3g26230 | LOC_Os03g48000 | Os03g0684400 | OsMGT3 | Detail |
| CX3g027834 | 3:25,586,631-25,589,240 | + | C1H3g27366 | C2H3g13044 | LOC_Os03g48010 | Os03g0684500 | - | Detail |
| CX3g025275 | 3:25,590,749-25,591,830 | - | C1H3g15233 | C2H3g22552 | LOC_Os03g48030 | Os03g0684700 | - | Detail |
| CX3g030044 | 3:25,595,798-25,597,900 | + | C1H3g05365 | C2H3g24042 | LOC_Os03g48040 | Os03g0685000 | OsFdC2, OsHDY1 | Detail |
| CX3g026303 | 3:25,601,089-25,603,917 | + | C1H3g13814 | C2H3g04933 | LOC_Os03g48050 | Os03g0685100 | - | Detail |
| CX3g030151 | 3:25,606,034-25,606,183 | - | - | - | - | - | - | Detail |
| CX3g027858 | 3:25,621,859-25,625,119 | + | C1H3g01967 | C2H3g27897 | LOC_Os03g48060 | Os03g0685300 | FLO19 | Detail |
| CX3g028901 | 3:25,631,177-25,634,604 | - | C1H3g16679 | C2H3g26335 | LOC_Os03g48080 | Os03g0685500 | - | Detail |
| CX3g029151 | 3:25,635,434-25,638,965 | - | C1H3g01229 | C2H3g24853 | LOC_Os03g48090 | Os03g0685600 | - | Detail |
| CX3g027759 | 3:25,639,821-25,652,299 | + | C1H3g30763 | C2H3g08146 | - | - | - | Detail |
| CX3g025545 | 3:25,659,908-25,670,180 | - | C1H3g31689 | C2H3g06193 | LOC_Os03g48140 | Os03g0686300 | - | Detail |
| CX3g025276 | 3:25,683,849-25,688,336 | + | C1H3g31064 | C2H3g12008 | LOC_Os03g48170 | Os03g0686900 | FLO6 | Detail |
| CX3g025668 | 3:25,689,338-25,694,473 | - | C1H3g04074 | C2H3g19404 | LOC_Os03g51050 | Os03g0687000 | OsNPF2.4, NPF2.4, OsPTR2, PTR2 | Detail |
| CX3g029198 | 3:25,706,341-25,710,342 | - | C1H3g27780 | C2H3g17935 | LOC_Os03g48190 | Os03g0687200 | - | Detail |
| CX3g025750 | 3:25,713,158-25,713,901 | - | C1H3g26805 | C2H3g12687 | LOC_Os03g48200 | Os03g0687400 | - | Detail |
| CX3g029222 | 3:25,714,978-25,715,724 | - | C1H3g31647 | C2H3g13078 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| CX3g028579 | 3:25,720,442-25,721,170 | - | C1H3g12014 | C2H3g05793 | LOC_Os03g48235 | Os03g0688000 | - | Detail |
| CX3g029090 | 3:25,725,405-25,730,331 | + | C1H3g24497 | C2H3g19874 | LOC_Os03g48260 | Os03g0688200 | - | Detail |