| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27777 | 1:26,903,577-26,904,881 | + | C2H1g14542 | CX1g000877 | LOC_Os01g52380 | Os01g0721800 | - | Detail |
| C1H1g16429 | 1:26,907,034-26,909,887 | - | C2H1g03938 | CX1g001695 | LOC_Os01g52390 | Os01g0721900 | - | Detail |
| C1H1g19540 | 1:26,913,451-26,917,004 | + | C2H1g29212 | CX1g005554 | LOC_Os01g52400 | Os01g0722100 | - | Detail |
| C1H1g14417 | 1:26,925,623-26,927,295 | + | C2H1g15644 | CX1g004391 | LOC_Os01g52410 | Os01g0722300 | Os2R_MYB14 | Detail |
| C1H1g17552 | 1:26,938,467-26,942,242 | + | C2H1g14945 | CX1g002677 | LOC_Os01g52450 | Os01g0722700 | OsHXK9 | Detail |
| C1H1g17968 | 1:26,946,286-26,949,083 | - | C2H1g16107 | CX1g001570 | LOC_Os01g52470 | Os01g0723000 | - | Detail |
| C1H1g22223 | 1:26,951,203-26,952,076 | + | C2H1g09375 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g00329 | 1:26,952,184-26,952,905 | + | C2H1g00796 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g27397 | 1:26,953,685-26,955,175 | - | C2H1g00282 | CX1g004240 | LOC_Os01g52490 | Os01g0723200 | - | Detail |
| C1H1g18013 | 1:26,962,480-26,968,150 | + | C2H1g25823 | CX1g001850 | LOC_Os01g52500 | Os01g0723400 | NADP-ME2, Os-NADP-ME2, Os-NADP-ME2-2 | Detail |
| C1H1g17264 | 1:26,969,834-26,975,477 | + | C2H1g08871 | CX1g003519 | LOC_Os01g52514 | Os01g0723500 | - | Detail |
| C1H1g03740 | 1:26,976,986-26,981,316 | + | C2H1g17638 | CX1g004209 | LOC_Os01g52530 | Os01g0723600 | - | Detail |
| C1H1g09315 | 1:26,983,980-26,987,890 | + | C2H1g22241 | CX1g004680 | LOC_Os01g52540 | Os01g0723700 | - | Detail |
| C1H1g17060 | 1:26,988,103-26,994,535 | - | C2H1g23039 | CX1g004575 | LOC_Os01g52550 | Os01g0723800 | - | Detail |
| C1H1g18463 | 1:27,012,831-27,022,129 | + | C2H1g05862 | CX1g004747 | LOC_Os01g52560 | Os01g0724500 | - | Detail |
| C1H1g09116 | 1:27,038,700-27,046,564 | + | C2H1g26023 | CX1g002347 | LOC_Os01g52610 | Os01g0725400 | - | Detail |
| C1H1g01881 | 1:27,047,370-27,050,594 | + | C2H1g19762 | CX1g003740 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| C1H1g28016 | 1:27,055,008-27,060,104 | + | C2H1g12468 | CX1g000922 | LOC_Os01g52640 | Os01g0725800 | - | Detail |
| C1H1g01009 | 1:27,060,442-27,061,041 | - | C2H1g25269 | CX1g004829 | LOC_Os01g52650 | Os01g0725900 | - | Detail |
| C1H1g26602 | 1:27,063,887-27,064,616 | - | C2H1g28455 | CX1g001737 | LOC_Os01g52660 | Os01g0726100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029265 | 3:25,380,567-25,383,731 | - | C1H3g03715 | C2H3g11834 | LOC_Os03g47740 | Os03g0680800 | - | Detail |
| CX3g026637 | 3:25,392,771-25,392,923 | - | - | - | - | - | - | Detail |
| CX3g028531 | 3:25,409,003-25,430,648 | + | C1H3g12498 | C2H3g10722 | LOC_Os03g47760 | Os03g0681300 | - | Detail |
| CX3g025611 | 3:25,432,017-25,436,695 | - | C1H3g24402 | C2H3g08660 | LOC_Os03g47770 | Os03g0681400 | - | Detail |
| CX3g025413 | 3:25,439,843-25,443,230 | + | C1H3g21990 | C2H3g06154 | LOC_Os03g47780 | Os03g0681700 | OsWD40-81, OsLST8, LST8 | Detail |
| CX3g030716 | 3:25,444,956-25,450,270 | - | C1H3g03027 | C2H3g08631 | LOC_Os03g47790 | Os03g0681800 | - | Detail |
| CX3g027526 | 3:25,457,037-25,457,204 | - | - | - | - | - | - | Detail |
| CX3g027830 | 3:25,459,881-25,460,318 | - | - | - | - | - | - | Detail |
| CX3g030858 | 3:25,461,387-25,465,205 | - | C1H3g11959 | C2H3g29470 | LOC_Os03g47800 | Os03g0681900 | - | Detail |
| CX3g025153 | 3:25,466,414-25,469,145 | - | C1H3g05321 | C2H3g25886 | - | - | - | Detail |
| CX3g026883 | 3:25,472,292-25,474,298 | + | - | - | - | - | - | Detail |
| CX3g029458 | 3:25,481,897-25,489,886 | - | C1H3g19741 | C2H3g14407 | LOC_Os03g47820 | Os03g0682200 | - | Detail |
| CX3g025680 | 3:25,507,191-25,508,558 | - | - | C2H3g13971 | - | Os03g0682822 | - | Detail |
| CX3g030162 | 3:25,515,549-25,516,322 | - | C1H3g26805 | C2H3g28221 | LOC_Os03g47890 | Os03g0683200 | - | Detail |
| CX3g027958 | 3:25,520,286-25,521,610 | - | C1H3g30362 | C2H3g09855 | LOC_Os03g47896 | Os03g0683300 | - | Detail |
| CX3g030594 | 3:25,523,089-25,523,754 | + | C1H3g26805 | C2H3g12687 | LOC_Os03g47910 | Os03g0683500 | - | Detail |
| CX3g026415 | 3:25,527,525-25,539,251 | + | C1H3g30757 | C2H3g15375 | LOC_Os03g47930 | Os03g0138600 | - | Detail |
| CX3g030593 | 3:25,540,862-25,544,834 | + | C1H3g31733 | C2H3g26490 | LOC_Os03g47940 | Os03g0683800 | - | Detail |
| CX3g027411 | 3:25,547,315-25,558,859 | - | C1H3g20424 | C2H3g09499 | LOC_Os03g47949 | Os03g0683900 | - | Detail |
| CX3g028427 | 3:25,560,515-25,564,343 | - | C1H3g20424 | C2H3g09499 | LOC_Os03g47970 | Os03g0684000 | - | Detail |