| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g12551 | 1:8,477,575-8,478,351 | - | C1H1g17487 | CX1g003184 | LOC_Os01g16610 | Os01g0272700 | - | Detail |
| C2H1g01447 | 1:8,479,514-8,482,878 | - | C1H1g31877 | CX1g000759 | LOC_Os01g16620 | Os01g0272800 | - | Detail |
| C2H1g15786 | 1:8,486,141-8,486,554 | + | - | CX1g006610 | LOC_Os01g18530 | Os01g0272901 | - | Detail |
| C2H1g14051 | 1:8,488,079-8,490,565 | - | C1H1g25498 | CX1g001142 | LOC_Os01g16640 | Os01g0273000 | - | Detail |
| C2H1g06113 | 1:8,493,383-8,493,964 | + | C1H1g16906 | CX1g005850 | LOC_Os01g16650 | Os01g0273100 | - | Detail |
| C2H1g14492 | 1:8,496,153-8,497,688 | + | - | CX1g004698 | LOC_Os01g16670 | Os01g0273300 | - | Detail |
| C2H1g03315 | 1:8,500,739-8,511,328 | + | C1H1g19385 | CX1g005280 | LOC_Os01g11920 | Os01g0273500 | - | Detail |
| C2H1g22682 | 1:8,518,519-8,525,166 | + | C1H1g23023 | CX1g006865 | LOC_Os01g16714 | Os01g0273800 | OsYUC9 | Detail |
| C2H1g16750 | 1:8,530,169-8,531,208 | + | C1H1g02893 | CX1g002073 | - | - | - | Detail |
| C2H1g10290 | 1:8,532,234-8,538,697 | + | C1H1g08545 | CX1g004368 | - | - | - | Detail |
| C2H1g08085 | 1:8,539,351-8,540,058 | + | C1H1g31069 | CX1g002650 | LOC_Os01g16770 | Os01g0274500 | - | Detail |
| C2H1g25011 | 1:8,567,399-8,568,493 | - | C1H1g20005 | CX1g003544 | LOC_Os01g16810 | Os01g0274800 | CSA, csa | Detail |
| C2H1g01383 | 1:8,602,387-8,604,904 | - | C1H1g10258 | CX1g004330 | LOC_Os01g16870 | Os01g0275200 | - | Detail |
| C2H1g20471 | 1:8,605,671-8,606,745 | - | C1H1g00916 | CX1g004330 | LOC_Os01g16860 | Os01g0275500 | - | Detail |
| C2H1g06000 | 1:8,610,362-8,618,214 | - | C1H1g07114 | CX1g004330 | LOC_Os01g16870 | Os01g0275600 | - | Detail |
| C2H1g09858 | 1:8,623,125-8,630,698 | - | C1H1g06227 | CX1g006091 | - | Os01g0275950 | - | Detail |
| C2H1g17305 | 1:8,637,748-8,640,711 | - | C1H1g24427 | CX1g000262 | LOC_Os01g16890 | Os01g0276000 | - | Detail |
| C2H1g00431 | 1:8,645,170-8,649,717 | + | C1H1g03189 | CX1g006712 | LOC_Os01g16900 | Os01g0276100 | - | Detail |
| C2H1g21617 | 1:8,651,012-8,656,336 | - | C1H1g17187 | CX1g003572 | LOC_Os01g16910 | Os01g0276200 | OsVDAC7 | Detail |
| C2H1g10026 | 1:8,660,848-8,661,282 | + | C1H1g02811 | CX1g005233 | LOC_Os01g16920 | Os01g0276300 | OsLEA1b | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025271 | 3:25,115,632-25,116,654 | + | C1H3g03770 | C2H3g30024 | LOC_Os03g47310 | Os03g0687700 | - | Detail |
| CX3g029842 | 3:25,118,172-25,119,005 | - | - | - | - | - | - | Detail |
| CX3g030320 | 3:25,138,043-25,139,364 | - | C1H3g06178 | C2H3g21545 | LOC_Os03g47360 | Os03g0677101 | - | Detail |
| CX3g027660 | 3:25,141,174-25,142,263 | - | C1H3g06178 | C2H3g21545 | LOC_Os03g47420 | Os03g0632200 | - | Detail |
| CX3g029375 | 3:25,154,231-25,154,392 | - | - | - | - | - | - | Detail |
| CX3g025529 | 3:25,157,076-25,158,618 | + | C1H3g06178 | C2H3g13262 | LOC_Os03g47420 | Os03g0677101 | - | Detail |
| CX3g029333 | 3:25,162,712-25,163,088 | - | C1H3g14608 | C2H3g19432 | - | Os03g0204600 | - | Detail |
| CX3g026424 | 3:25,174,487-25,174,639 | - | C1H3g06142 | C2H3g26883 | LOC_Os03g57560 | Os03g0800200 | MEL1, mel1, OsMEL1, MEAL1, OsMEAL1 | Detail |
| CX3g026352 | 3:25,209,663-25,210,015 | + | - | - | LOC_Os03g47480 | - | - | Detail |
| CX3g030452 | 3:25,215,984-25,216,685 | + | C1H3g17542 | C2H3g02490 | LOC_Os03g47500 | Os03g0678400 | - | Detail |
| CX3g031146 | 3:25,219,231-25,219,380 | - | - | - | - | Os01g0728000 | - | Detail |
| CX3g028291 | 3:25,230,184-25,231,224 | - | - | - | - | Os03g0300801 | - | Detail |
| CX3g029671 | 3:25,234,209-25,237,429 | + | C1H3g10676 | C2H3g13940 | LOC_Os03g47540 | Os03g0678950 | - | Detail |
| CX3g025861 | 3:25,238,203-25,240,466 | - | C1H3g02102 | C2H3g05697 | LOC_Os03g47550 | Os03g0679000 | - | Detail |
| CX3g030786 | 3:25,268,948-25,274,869 | - | C1H3g29166 | C2H3g01612 | LOC_Os03g47580 | Os03g0679300 | - | Detail |
| CX3g030613 | 3:25,274,640-25,274,948 | + | - | - | - | - | - | Detail |
| CX3g031285 | 3:25,281,085-25,284,511 | + | C1H3g10616 | C2H3g01111 | LOC_Os03g47610 | Os03g0679700 | - | Detail |
| CX3g030869 | 3:25,290,156-25,290,317 | + | - | - | - | Os01g0612350 | - | Detail |
| CX3g028918 | 3:25,292,514-25,292,687 | + | - | - | - | - | - | Detail |
| CX3g027869 | 3:25,373,544-25,375,559 | - | C1H3g15008 | C2H3g05036 | LOC_Os03g47730 | Os03g0680700 | - | Detail |