| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g06001 | 9:17,937,130-17,938,065 | + | C1H9g06898 | CX9g055639 | LOC_Os09g36760 | Os09g0538700 | - | Detail |
| C2H9g27815 | 9:17,938,103-17,941,043 | + | C1H9g29591 | CX9g055639 | LOC_Os09g36760 | Os09g0538700 | - | Detail |
| C2H9g20614 | 9:17,941,495-17,947,247 | - | C1H9g06893 | CX9g055160 | LOC_Os09g36770 | Os09g0538800 | - | Detail |
| C2H9g01552 | 9:17,953,597-17,957,003 | - | C1H9g17651 | CX9g056861 | LOC_Os09g36800 | Os09g0539100 | - | Detail |
| C2H9g21684 | 9:17,958,733-17,963,690 | + | C1H9g23415 | CX9g056453 | LOC_Os09g36810 | Os09g0539200 | - | Detail |
| C2H9g12389 | 9:17,966,203-17,969,309 | + | C1H9g18894 | CX9g057403 | LOC_Os09g36820 | Os09g0539400 | - | Detail |
| C2H9g19569 | 9:17,969,938-17,972,241 | - | C1H9g22954 | CX9g056828 | LOC_Os09g36830 | Os09g0539500 | - | Detail |
| C2H9g22706 | 9:17,980,196-17,982,727 | - | C1H9g21022 | CX9g055116 | LOC_Os09g36860 | Os09g0539800 | - | Detail |
| C2H9g18485 | 9:17,990,937-17,992,638 | - | C1H9g06205 | CX9g056143 | LOC_Os09g36880 | Os09g0540400 | - | Detail |
| C2H9g22888 | 9:17,995,634-18,000,826 | + | C1H9g23063 | CX9g055896 | LOC_Os09g36900 | Os09g0540600 | - | Detail |
| C2H9g26403 | 9:18,013,700-18,014,569 | + | C1H9g23615 | CX9g055766 | LOC_Os09g36910 | Os09g0540800 | BZIP77, OsbZIP77, OsFD1 | Detail |
| C2H9g30227 | 9:18,025,980-18,029,983 | - | C1H9g26475 | CX9g055175 | LOC_Os09g36920 | Os09g0540900 | - | Detail |
| C2H9g19063 | 9:18,035,611-18,037,025 | + | C1H9g19249 | CX9g056388 | LOC_Os09g36930 | Os09g0541000 | - | Detail |
| C2H9g09532 | 9:18,038,884-18,039,547 | - | C1H9g27842 | CX9g057449 | LOC_Os09g36940 | Os09g0541100 | - | Detail |
| C2H9g22675 | 9:18,040,226-18,040,450 | - | C1H9g12978 | - | - | - | - | Detail |
| C2H9g14047 | 9:18,056,908-18,058,988 | - | C1H9g05693 | CX9g055205 | LOC_Os09g36976 | Os09g0541500 | - | Detail |
| C2H9g00965 | 9:18,061,340-18,061,996 | - | C1H9g25058 | CX9g056518 | LOC_Os09g36982 | Os09g0541600 | - | Detail |
| C2H9g20569 | 9:18,063,244-18,064,761 | + | C1H9g02735 | CX9g058033 | LOC_Os09g36990 | Os09g0541700 | - | Detail |
| C2H9g19893 | 9:18,065,227-18,068,667 | - | C1H9g18787 | CX9g055298 | LOC_Os09g37000 | Os09g0541900 | - | Detail |
| C2H9g10407 | 9:18,070,223-18,073,742 | - | C1H9g03436 | CX9g056735 | LOC_Os09g37006 | Os09g0542000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025271 | 3:25,115,632-25,116,654 | + | C1H3g03770 | C2H3g30024 | LOC_Os03g47310 | Os03g0687700 | - | Detail |
| CX3g029842 | 3:25,118,172-25,119,005 | - | - | - | - | - | - | Detail |
| CX3g030320 | 3:25,138,043-25,139,364 | - | C1H3g06178 | C2H3g21545 | LOC_Os03g47360 | Os03g0677101 | - | Detail |
| CX3g027660 | 3:25,141,174-25,142,263 | - | C1H3g06178 | C2H3g21545 | LOC_Os03g47420 | Os03g0632200 | - | Detail |
| CX3g029375 | 3:25,154,231-25,154,392 | - | - | - | - | - | - | Detail |
| CX3g025529 | 3:25,157,076-25,158,618 | + | C1H3g06178 | C2H3g13262 | LOC_Os03g47420 | Os03g0677101 | - | Detail |
| CX3g029333 | 3:25,162,712-25,163,088 | - | C1H3g14608 | C2H3g19432 | - | Os03g0204600 | - | Detail |
| CX3g026424 | 3:25,174,487-25,174,639 | - | C1H3g06142 | C2H3g26883 | LOC_Os03g57560 | Os03g0800200 | MEL1, mel1, OsMEL1, MEAL1, OsMEAL1 | Detail |
| CX3g026352 | 3:25,209,663-25,210,015 | + | - | - | LOC_Os03g47480 | - | - | Detail |
| CX3g030452 | 3:25,215,984-25,216,685 | + | C1H3g17542 | C2H3g02490 | LOC_Os03g47500 | Os03g0678400 | - | Detail |
| CX3g031146 | 3:25,219,231-25,219,380 | - | - | - | - | Os01g0728000 | - | Detail |
| CX3g028291 | 3:25,230,184-25,231,224 | - | - | - | - | Os03g0300801 | - | Detail |
| CX3g029671 | 3:25,234,209-25,237,429 | + | C1H3g10676 | C2H3g13940 | LOC_Os03g47540 | Os03g0678950 | - | Detail |
| CX3g025861 | 3:25,238,203-25,240,466 | - | C1H3g02102 | C2H3g05697 | LOC_Os03g47550 | Os03g0679000 | - | Detail |
| CX3g030786 | 3:25,268,948-25,274,869 | - | C1H3g29166 | C2H3g01612 | LOC_Os03g47580 | Os03g0679300 | - | Detail |
| CX3g030613 | 3:25,274,640-25,274,948 | + | - | - | - | - | - | Detail |
| CX3g031285 | 3:25,281,085-25,284,511 | + | C1H3g10616 | C2H3g01111 | LOC_Os03g47610 | Os03g0679700 | - | Detail |
| CX3g030869 | 3:25,290,156-25,290,317 | + | - | - | - | Os01g0612350 | - | Detail |
| CX3g028918 | 3:25,292,514-25,292,687 | + | - | - | - | - | - | Detail |
| CX3g027869 | 3:25,373,544-25,375,559 | - | C1H3g15008 | C2H3g05036 | LOC_Os03g47730 | Os03g0680700 | - | Detail |