| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g24692 | 2:23,261,898-23,264,753 | - | C2H2g28960 | CX2g019549 | LOC_Os02g41480 | Os02g0623600 | - | Detail |
| C1H2g28052 | 2:23,272,060-23,273,777 | - | C2H2g23490 | - | LOC_Os02g41490 | - | - | Detail |
| C1H2g10845 | 2:23,274,791-23,276,783 | - | C2H2g09222 | CX2g019549 | LOC_Os02g41500 | Os02g0623932 | - | Detail |
| C1H2g31771 | 2:23,276,819-23,277,253 | - | C2H2g05626 | CX2g019332 | LOC_Os02g41500 | Os02g0624100 | - | Detail |
| C1H2g14607 | 2:23,283,546-23,284,442 | - | C2H2g21291 | CX2g020985 | LOC_Os02g41510 | Os02g0624300 | OsMYB30, OsMYB5P | Detail |
| C1H2g25292 | 2:23,296,362-23,301,852 | + | C2H2g15398 | CX2g019605 | LOC_Os02g41520 | Os02g0624400 | - | Detail |
| C1H2g21346 | 2:23,305,811-23,312,212 | + | C2H2g09545 | CX2g021076 | LOC_Os02g41550 | Os02g0625000 | - | Detail |
| C1H2g30957 | 2:23,315,370-23,315,628 | - | - | - | - | - | - | Detail |
| C1H2g23857 | 2:23,315,683-23,315,897 | - | - | - | - | - | - | Detail |
| C1H2g17897 | 2:23,331,977-23,333,420 | + | C2H2g18059 | CX2g019216 | LOC_Os02g41580 | Os02g0625300 | - | Detail |
| C1H2g11053 | 2:23,337,994-23,343,678 | - | C2H2g11933 | CX2g019321 | LOC_Os02g41590 | Os02g0625500 | - | Detail |
| C1H2g01239 | 2:23,350,642-23,357,309 | + | C2H2g22654 | CX2g021369 | LOC_Os02g41610 | Os02g0625900 | - | Detail |
| C1H2g24503 | 2:23,367,290-23,371,213 | - | C2H2g12458 | CX2g019721 | LOC_Os02g41630 | Os02g0626100 | - | Detail |
| C1H2g10363 | 2:23,379,727-23,384,648 | - | C2H2g01685 | CX2g021604 | LOC_Os02g41650 | Os02g0626400 | - | Detail |
| C1H2g23853 | 2:23,388,069-23,390,210 | - | C2H2g30462 | CX2g023963 | LOC_Os02g41670 | Os02g0626600 | PAL3 | Detail |
| C1H2g05283 | 2:23,393,200-23,395,822 | - | C2H2g15020 | CX2g024160 | LOC_Os02g41680 | Os02g0627100 | OsPAL4 | Detail |
| C1H2g07931 | 2:23,415,975-23,418,774 | + | C2H2g27127 | CX2g021913 | LOC_Os02g41710 | Os02g0627700 | OsCNGC7 | Detail |
| C1H2g13176 | 2:23,419,344-23,420,940 | - | C2H2g10818 | CX2g021975 | LOC_Os02g41760 | Os02g0627900 | - | Detail |
| C1H2g03519 | 2:23,426,139-23,429,154 | + | C2H2g11015 | CX2g024868 | LOC_Os02g41770 | Os02g0628000 | - | Detail |
| C1H2g23138 | 2:23,435,330-23,439,285 | + | C2H2g16036 | CX2g021958 | LOC_Os02g41780 | Os02g0628200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025271 | 3:25,115,632-25,116,654 | + | C1H3g03770 | C2H3g30024 | LOC_Os03g47310 | Os03g0687700 | - | Detail |
| CX3g029842 | 3:25,118,172-25,119,005 | - | - | - | - | - | - | Detail |
| CX3g030320 | 3:25,138,043-25,139,364 | - | C1H3g06178 | C2H3g21545 | LOC_Os03g47360 | Os03g0677101 | - | Detail |
| CX3g027660 | 3:25,141,174-25,142,263 | - | C1H3g06178 | C2H3g21545 | LOC_Os03g47420 | Os03g0632200 | - | Detail |
| CX3g029375 | 3:25,154,231-25,154,392 | - | - | - | - | - | - | Detail |
| CX3g025529 | 3:25,157,076-25,158,618 | + | C1H3g06178 | C2H3g13262 | LOC_Os03g47420 | Os03g0677101 | - | Detail |
| CX3g029333 | 3:25,162,712-25,163,088 | - | C1H3g14608 | C2H3g19432 | - | Os03g0204600 | - | Detail |
| CX3g026424 | 3:25,174,487-25,174,639 | - | C1H3g06142 | C2H3g26883 | LOC_Os03g57560 | Os03g0800200 | MEL1, mel1, OsMEL1, MEAL1, OsMEAL1 | Detail |
| CX3g026352 | 3:25,209,663-25,210,015 | + | - | - | LOC_Os03g47480 | - | - | Detail |
| CX3g030452 | 3:25,215,984-25,216,685 | + | C1H3g17542 | C2H3g02490 | LOC_Os03g47500 | Os03g0678400 | - | Detail |
| CX3g031146 | 3:25,219,231-25,219,380 | - | - | - | - | Os01g0728000 | - | Detail |
| CX3g028291 | 3:25,230,184-25,231,224 | - | - | - | - | Os03g0300801 | - | Detail |
| CX3g029671 | 3:25,234,209-25,237,429 | + | C1H3g10676 | C2H3g13940 | LOC_Os03g47540 | Os03g0678950 | - | Detail |
| CX3g025861 | 3:25,238,203-25,240,466 | - | C1H3g02102 | C2H3g05697 | LOC_Os03g47550 | Os03g0679000 | - | Detail |
| CX3g030786 | 3:25,268,948-25,274,869 | - | C1H3g29166 | C2H3g01612 | LOC_Os03g47580 | Os03g0679300 | - | Detail |
| CX3g030613 | 3:25,274,640-25,274,948 | + | - | - | - | - | - | Detail |
| CX3g031285 | 3:25,281,085-25,284,511 | + | C1H3g10616 | C2H3g01111 | LOC_Os03g47610 | Os03g0679700 | - | Detail |
| CX3g030869 | 3:25,290,156-25,290,317 | + | - | - | - | Os01g0612350 | - | Detail |
| CX3g028918 | 3:25,292,514-25,292,687 | + | - | - | - | - | - | Detail |
| CX3g027869 | 3:25,373,544-25,375,559 | - | C1H3g15008 | C2H3g05036 | LOC_Os03g47730 | Os03g0680700 | - | Detail |