| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g20674 | 11:25,303,260-25,305,010 | - | C1H11g24803 | - | LOC_Os11g48030 | Os11g0707700 | - | Detail |
| C2H11g23789 | 11:25,308,395-25,309,441 | - | C1H11g24803 | CX11g012815 | LOC_Os11g48030 | Os11g0707700 | - | Detail |
| C2H11g18637 | 11:25,310,145-25,313,646 | + | C1H11g00342 | CX11g011522 | LOC_Os11g48040 | Os11g0707800 | OsUCP2 | Detail |
| C2H11g16826 | 11:25,322,422-25,325,285 | + | C1H11g07178 | CX11g014798 | LOC_Os11g48060 | Os11g0708100 | - | Detail |
| C2H11g30672 | 11:25,331,182-25,333,640 | + | C1H11g08651 | CX11g013159 | LOC_Os11g48070 | Os11g0708400 | - | Detail |
| C2H11g26751 | 11:25,335,956-25,336,894 | + | C1H10g01786 | CX11g012727 | LOC_Os11g48080 | Os11g0708500 | OsPDX1.3 | Detail |
| C2H11g05320 | 11:25,339,795-25,351,052 | - | C1H11g11341 | CX11g012342 | LOC_Os11g48090 | Os11g0708600 | - | Detail |
| C2H12g20675 | 12:22,652-23,719 | - | C1H12g21021 | CX12g015411 | - | - | - | Detail |
| C2H12g23164 | 12:27,770-28,455 | + | C1H12g08161 | CX12g017379 | - | - | - | Detail |
| C2H12g12006 | 12:28,960-31,581 | + | C1H12g08161 | CX12g015402 | - | - | - | Detail |
| C2H12g19296 | 12:36,886-47,626 | - | C1H12g25598 | CX12g017565 | - | - | - | Detail |
| C2H12g28928 | 12:48,907-50,400 | - | C1H11g11120 | CX12g016457 | LOC_Os11g01010 | Os11g0100100 | - | Detail |
| C2H12g27338 | 12:50,625-53,055 | + | C1H12g25928 | CX12g015584 | LOC_Os12g01010 | Os12g0100100 | - | Detail |
| C2H12g08992 | 12:53,444-56,416 | - | C1H12g18793 | CX12g015048 | LOC_Os12g01020 | Os12g0100200 | - | Detail |
| C2H12g02041 | 12:60,805-62,102 | - | C1H11g01849 | CX12g016135 | LOC_Os12g01030 | Os12g0100500 | - | Detail |
| C2H12g24638 | 12:63,827-65,591 | - | C1H11g20414 | CX11g013460 | - | - | - | Detail |
| C2H12g25359 | 12:80,010-86,692 | + | C1H12g18361 | CX12g016373 | LOC_Os12g01080 | Os11g0101200 | OsRpp30 | Detail |
| C2H12g22259 | 12:87,602-87,884 | + | C1H12g27411 | - | LOC_Os12g01090 | - | - | Detail |
| C2H12g02893 | 12:89,326-90,640 | + | C1H12g07544 | CX12g017682 | LOC_Os12g01100 | Os11g0101200 | OsRpp30 | Detail |
| C2H12g09125 | 12:114,841-115,452 | + | C1H11g18239 | CX12g018648 | LOC_Os12g01120 | Os12g0101600 | WOX3, OsWOX3, OsNS, OsPRS | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029261 | 3:24,634,358-24,634,519 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX3g029026 | 3:24,640,325-24,640,474 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX3g030979 | 3:24,642,671-24,643,875 | - | C1H3g09851 | C2H3g16749 | LOC_Os03g46454 | Os03g0667300 | OsIRT2 | Detail |
| CX3g026815 | 3:24,648,080-24,649,234 | + | C1H3g18608 | C2H3g22563 | LOC_Os03g46460 | Os03g0667400 | - | Detail |
| CX3g025528 | 3:24,651,509-24,656,208 | - | C1H3g21913 | C2H3g11751 | LOC_Os03g46470 | Os03g0667500 | OsIRT1 | Detail |
| CX3g026005 | 3:24,658,458-24,663,283 | - | C1H3g14101 | C2H3g12375 | LOC_Os03g46480 | Os03g0667700 | - | Detail |
| CX3g027807 | 3:24,670,701-24,671,015 | - | - | C2H3g10678 | LOC_Os03g48904 | Os03g0204366 | - | Detail |
| CX3g025010 | 3:24,678,825-24,680,293 | + | C1H3g27711 | C2H3g21545 | LOC_Os03g46510 | Os03g0668000 | - | Detail |
| CX3g030801 | 3:24,691,490-24,693,008 | + | C1H3g30467 | C2H3g00299 | LOC_Os03g46530 | Os03g0668100 | - | Detail |
| CX3g025379 | 3:24,697,435-24,697,635 | - | C1H3g03171 | C2H3g03273 | - | Os03g0337500 | OsHAK8 | Detail |
| CX3g030508 | 3:24,701,833-24,705,720 | + | C1H3g14274 | C2H3g13344 | LOC_Os03g46550 | Os03g0668300 | - | Detail |
| CX3g030584 | 3:24,709,886-24,710,062 | - | - | - | LOC_Os03g59146 | - | - | Detail |
| CX3g030814 | 3:24,710,939-24,712,093 | + | C1H3g18608 | C2H3g22563 | LOC_Os03g46460 | Os03g0668400 | - | Detail |
| CX3g026468 | 3:24,731,242-24,732,432 | + | C1H3g19376 | C2H3g18832 | LOC_Os03g46570 | Os03g0668500 | - | Detail |
| CX3g026071 | 3:24,741,004-24,742,896 | + | C1H3g28696 | C2H3g11477 | LOC_Os03g46600 | Os03g0668900 | - | Detail |
| CX3g026665 | 3:24,744,005-24,750,348 | - | C1H3g23346 | C2H3g10479 | LOC_Os03g46610 | Os03g0669000 | - | Detail |
| CX3g025239 | 3:24,756,222-24,756,518 | + | - | C2H4g03445 | - | - | - | Detail |
| CX3g029802 | 3:24,757,479-24,758,321 | - | C1H3g28193 | C2H3g24036 | LOC_Os03g46640 | Os03g0669100 | - | Detail |
| CX3g029587 | 3:24,760,260-24,767,639 | - | C1H3g02699 | C2H3g13024 | LOC_Os03g46650 | Os03g0669200 | OsWD40-80, RGbeta1, RGB1 | Detail |
| CX3g030404 | 3:24,769,666-24,771,779 | - | C1H3g01900 | C2H3g20768 | LOC_Os03g46660 | Os03g0669300 | - | Detail |