| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g16936 | 6:26,305,257-26,309,460 | + | C1H6g07579 | CX6g044738 | LOC_Os06g49230 | Os06g0706400 | OsPTR9 | Detail |
| C2H6g07496 | 6:26,318,632-26,320,509 | - | C1H6g14791 | CX6g045701 | LOC_Os06g49300 | Os06g0707000 | XYXT1 | Detail |
| C2H6g02584 | 6:26,323,425-26,330,572 | + | C1H6g07781 | CX6g042851 | LOC_Os06g49310 | Os06g0707100 | - | Detail |
| C2H6g28355 | 6:26,330,394-26,332,385 | - | C1H6g30332 | CX6g044744 | LOC_Os06g49320 | Os06g0707200 | OsXAT4 | Detail |
| C2H6g09646 | 6:26,340,773-26,345,257 | - | C1H6g20503 | CX6g043432 | LOC_Os06g49360 | Os06g0707350 | - | Detail |
| C2H6g02972 | 6:26,358,873-26,363,396 | - | C1H6g28599 | CX6g043180 | LOC_Os06g49390 | Os06g0707733 | - | Detail |
| C2H6g12364 | 6:26,373,194-26,381,115 | - | C1H6g28599 | CX6g043432 | LOC_Os06g49420 | Os06g0707700 | - | Detail |
| C2H6g06456 | 6:26,381,954-26,383,389 | - | C1H6g18704 | - | - | - | - | Detail |
| C2H6g06263 | 6:26,385,335-26,390,272 | + | C1H6g17358 | CX6g042732 | LOC_Os06g49430 | Os06g0708000 | BWMK1, OsBWMK1M | Detail |
| C2H6g00786 | 6:26,391,339-26,397,254 | - | C1H6g07108 | CX6g043918 | LOC_Os06g49440 | Os06g0708100 | - | Detail |
| C2H6g22817 | 6:26,397,559-26,403,996 | + | C1H6g25506 | CX6g041443 | LOC_Os06g49450 | Os06g0708200 | OsMTOPVIB | Detail |
| C2H6g13876 | 6:26,404,653-26,406,561 | + | C1H6g16157 | CX6g042713 | LOC_Os06g49460 | Os06g0708300 | - | Detail |
| C2H6g01779 | 6:26,407,653-26,409,481 | + | C1H6g26774 | CX6g043935 | LOC_Os06g49470 | Os06g0708400 | CYP19-4, OsCYP19-4, OsCYP-16, OsCYP19-3 | Detail |
| C2H6g06908 | 6:26,410,614-26,413,172 | + | C1H6g04243 | CX6g042472 | LOC_Os06g49480 | Os06g0708500 | - | Detail |
| C2H6g01327 | 6:26,415,715-26,418,824 | - | C1H6g00335 | CX6g043514 | LOC_Os06g49500 | Os06g0708700 | - | Detail |
| C2H6g14145 | 6:26,425,696-26,431,947 | - | C1H6g23362 | CX6g044369 | LOC_Os06g49505 | Os06g0708832 | - | Detail |
| C2H6g21552 | 6:26,432,605-26,433,753 | + | C1H6g28139 | CX6g045386 | LOC_Os06g49520 | Os06g0709000 | - | Detail |
| C2H6g27299 | 6:26,434,434-26,437,295 | + | C1H6g23498 | CX6g043825 | LOC_Os06g49530 | Os06g0709100 | - | Detail |
| C2H6g19038 | 6:26,437,837-26,440,071 | - | C1H6g20666 | CX6g044020 | LOC_Os06g49550 | Os06g0597800 | - | Detail |
| C2H6g21852 | 6:26,450,253-26,451,402 | - | C1H6g12428 | CX6g041405 | LOC_Os06g49640 | Os06g0710300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004589 | 1:16,839,672-16,839,896 | + | C1H3g13406 | - | - | - | - | Detail |
| CX1g005301 | 1:16,847,211-16,847,621 | - | - | - | - | Os01g0509750 | - | Detail |
| CX1g001437 | 1:16,850,593-16,853,628 | + | C1H1g15462 | C2H1g19341 | LOC_Os01g32640 | Os01g0509900 | - | Detail |
| CX1g001296 | 1:16,854,526-16,854,792 | + | - | - | - | - | - | Detail |
| CX1g000669 | 1:16,866,973-16,871,668 | + | C1H1g09530 | C2H1g03532 | LOC_Os01g32660 | Os01g0510100 | OsMKK6, OsMEK1 | Detail |
| CX1g006994 | 1:16,873,670-16,874,014 | - | - | - | LOC_Os01g32670 | Os01g0510200 | - | Detail |
| CX1g001061 | 1:16,883,310-16,896,998 | + | C1H1g03786 | C2H1g05772 | LOC_Os01g32710 | Os01g0510500 | - | Detail |
| CX1g004721 | 1:16,898,489-16,901,909 | - | C1H1g15241 | C2H1g08671 | LOC_Os01g32730 | Os01g0510600 | OsFLU1, OXP | Detail |
| CX1g000908 | 1:16,910,858-16,917,965 | - | C1H1g26631 | C2H1g26446 | LOC_Os01g32750 | Os01g0510800 | - | Detail |
| CX1g001274 | 1:16,919,188-16,919,724 | - | C1H1g18869 | C2H1g19008 | LOC_Os04g08170 | Os01g0759200 | OsCIPK30 | Detail |
| CX1g001608 | 1:16,925,929-16,926,843 | + | - | - | - | - | - | Detail |
| CX1g002333 | 1:16,964,303-16,966,674 | - | C1H1g16518 | C2H1g29547 | LOC_Os01g32780 | Os01g0511100 | OsUSP5 | Detail |
| CX1g000349 | 1:16,969,577-16,971,590 | - | C1H1g30895 | C2H1g25988 | LOC_Os01g32790 | Os01g0511200 | - | Detail |
| CX1g005541 | 1:16,973,592-16,976,641 | - | C1H1g00873 | C2H1g01415 | LOC_Os01g32800 | Os01g0511300 | OsRpn9a | Detail |
| CX1g003225 | 1:16,992,474-16,998,005 | - | C1H1g16898 | C2H1g19462 | LOC_Os01g32830 | Os01g0511600 | OsPLGG1 | Detail |
| CX1g003209 | 1:17,003,091-17,003,276 | + | - | - | - | Os01g0511700 | - | Detail |
| CX1g003780 | 1:17,012,725-17,012,937 | - | - | - | - | Os01g0511800 | - | Detail |
| CX1g003635 | 1:17,034,355-17,042,039 | + | C1H1g25757 | C2H1g19337 | LOC_Os01g32870 | Os01g0512100 | - | Detail |
| CX1g003040 | 1:17,043,337-17,046,174 | + | C1H1g18737 | C2H1g00528 | LOC_Os01g32880 | Os01g0512200 | - | Detail |
| CX1g002718 | 1:17,061,682-17,062,150 | + | - | C2H4g03445 | - | - | - | Detail |