| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27186 | 12:8,027,831-8,030,743 | - | - | - | - | - | - | Detail |
| C1H12g22810 | 12:8,032,441-8,033,926 | - | C2H3g23130 | - | - | - | - | Detail |
| C1H12g30337 | 12:8,046,615-8,050,263 | + | C2H12g15577 | CX12g015656 | LOC_Os12g16620 | - | - | Detail |
| C1H12g12690 | 12:8,062,533-8,063,063 | + | C2H12g13804 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C1H12g01774 | 12:8,065,294-8,065,512 | - | - | - | - | - | - | Detail |
| C1H12g04576 | 12:8,065,437-8,074,333 | + | C2H12g25263 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C1H12g20271 | 12:8,081,573-8,081,926 | + | - | - | - | - | - | Detail |
| C1H12g26358 | 12:8,081,955-8,082,293 | + | C2H12g29205 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C1H12g26040 | 12:8,086,905-8,092,004 | - | C2H5g06041 | CX9g058196 | LOC_Os10g29274 | Os10g0428200 | - | Detail |
| C1H12g24303 | 12:8,098,217-8,098,549 | + | C2H12g22341 | CX12g016418 | LOC_Os12g16370 | - | - | Detail |
| C1H12g20439 | 12:8,103,063-8,105,960 | + | C2H12g01086 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C1H12g24834 | 12:8,116,448-8,118,408 | - | C2H12g04535 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C1H12g27646 | 12:8,194,063-8,199,131 | - | C2H12g04709 | CX12g016443 | LOC_Os12g17070 | - | - | Detail |
| C1H12g23758 | 12:8,214,290-8,217,091 | + | C2H12g27718 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C1H12g29906 | 12:8,219,778-8,221,352 | - | C2H12g03089 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C1H12g00865 | 12:8,235,806-8,236,450 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17090 | Os12g0270675 | - | Detail |
| C1H12g14089 | 12:8,252,859-8,254,623 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17140 | Os12g0270675 | - | Detail |
| C1H12g01259 | 12:8,274,379-8,275,645 | - | - | - | - | - | - | Detail |
| C1H12g31898 | 12:8,277,268-8,279,819 | + | - | - | - | Os12g0231600 | - | Detail |
| C1H12g17449 | 12:8,295,784-8,297,542 | - | C2H12g14706 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026067 | 3:24,465,845-24,466,534 | - | C1H3g28997 | C2H3g20889 | LOC_Os03g46070 | Os03g0663500 | - | Detail |
| CX3g030773 | 3:24,490,882-24,494,042 | + | C1H3g12643 | C2H3g27587 | LOC_Os03g46090 | Os03g0663700 | - | Detail |
| CX3g031226 | 3:24,497,352-24,499,469 | - | C1H3g29144 | C2H3g16281 | LOC_Os03g46100 | Os03g0663800 | FLOC1 | Detail |
| CX3g026799 | 3:24,500,581-24,502,979 | - | C1H3g10937 | C2H3g05304 | LOC_Os03g46110 | Os03g0663900 | EPAD1 | Detail |
| CX3g027937 | 3:24,507,307-24,513,532 | + | C1H3g22844 | C2H3g13262 | LOC_Os03g46140 | Os03g0664300 | - | Detail |
| CX3g030100 | 3:24,514,269-24,515,005 | + | C1H3g22844 | C2H3g03743 | LOC_Os03g46150 | Os03g0664400 | - | Detail |
| CX3g026593 | 3:24,522,034-24,522,816 | + | C1H3g05960 | C2H3g25255 | LOC_Os03g46180 | Os03g0664600 | - | Detail |
| CX3g028782 | 3:24,523,828-24,526,469 | - | C1H3g08349 | C2H3g30526 | LOC_Os03g46190 | Os03g0664700 | - | Detail |
| CX3g030949 | 3:24,526,671-24,527,378 | + | C1H3g19227 | C2H3g29200 | LOC_Os03g46200 | Os03g0664800 | - | Detail |
| CX3g028453 | 3:24,534,953-24,535,893 | + | C1H3g19227 | C2H3g29200 | LOC_Os03g46250 | Os03g0665000 | - | Detail |
| CX3g028439 | 3:24,538,212-24,540,654 | - | C1H3g03624 | C2H3g13481 | LOC_Os03g46260 | Os03g0665200 | OsFLZ11 | Detail |
| CX3g025809 | 3:24,568,980-24,569,327 | + | C1H3g16143 | C2H3g01208 | LOC_Os03g46300 | Os03g0665700 | - | Detail |
| CX3g030454 | 3:24,574,222-24,577,129 | + | C1H3g02596 | C2H3g02010 | LOC_Os03g46310 | Os03g0665800 | - | Detail |
| CX3g030422 | 3:24,582,231-24,588,605 | + | C1H3g06192 | C2H3g24958 | LOC_Os03g46330 | Os03g0666100 | - | Detail |
| CX3g025831 | 3:24,589,210-24,592,713 | - | C1H3g26270 | C2H3g06923 | LOC_Os03g46340 | Os03g0666200 | OsSWAP70A | Detail |
| CX3g029931 | 3:24,598,036-24,599,158 | + | C1H3g10336 | C2H3g08439 | LOC_Os03g46350 | Os03g0666300 | - | Detail |
| CX3g027340 | 3:24,608,622-24,612,023 | + | C1H3g06798 | C2H3g02623 | LOC_Os03g46390 | Os03g0666500 | - | Detail |
| CX3g026425 | 3:24,615,404-24,618,001 | - | C1H3g03865 | C2H3g22843 | LOC_Os03g46410 | Os03g0666700 | - | Detail |
| CX3g029763 | 3:24,622,917-24,623,252 | + | - | - | - | Os03g0666800 | - | Detail |
| CX3g026086 | 3:24,628,705-24,631,260 | - | C1H3g13561 | C2H3g09706 | LOC_Os03g46440 | Os03g0667100 | - | Detail |