| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07210 | 1:36,701,248-36,706,802 | + | C2H1g00426 | CX1g000756 | LOC_Os01g71200 | Os01g0938200 | - | Detail |
| C1H1g13834 | 1:36,709,163-36,710,152 | - | - | CX1g000266 | LOC_Os01g71210 | Os01g0938400 | - | Detail |
| C1H1g26126 | 1:36,712,091-36,717,052 | - | C2H1g14108 | CX1g004308 | LOC_Os01g71220 | Os01g0938600 | - | Detail |
| C1H1g10097 | 1:36,721,952-36,724,804 | + | C2H1g29372 | CX1g004180 | LOC_Os01g71230 | Os01g0938900 | - | Detail |
| C1H1g13399 | 1:36,728,801-36,729,172 | + | C2H1g06212 | CX1g005905 | - | Os01g0939000 | - | Detail |
| C1H1g17991 | 1:36,730,047-36,736,200 | + | C2H1g03097 | CX1g004665 | LOC_Os01g71240 | Os01g0939100 | - | Detail |
| C1H1g18399 | 1:36,736,922-36,738,715 | - | C2H1g07622 | CX1g005484 | LOC_Os01g71250 | Os01g0939200 | - | Detail |
| C1H1g15855 | 1:36,739,998-36,743,046 | - | C2H1g16653 | CX1g002440 | LOC_Os01g71256 | Os01g0939300 | - | Detail |
| C1H1g14395 | 1:36,745,046-36,748,212 | - | C2H1g17831 | CX1g005035 | LOC_Os01g71262 | Os01g0939400 | - | Detail |
| C1H1g17803 | 1:36,750,934-36,752,148 | + | C2H7g09412 | CX1g001018 | LOC_Os01g71270 | Os01g0939500 | - | Detail |
| C1H1g19591 | 1:36,754,537-36,758,865 | + | C2H1g21755 | CX1g007004 | LOC_Os01g71280 | Os01g0939600 | - | Detail |
| C1H1g21264 | 1:36,760,002-36,773,868 | + | C2H1g29286 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C1H1g12592 | 1:36,774,143-36,779,177 | + | C2H1g28290 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C1H1g26080 | 1:36,811,858-36,814,634 | + | C2H1g22141 | CX1g000893 | LOC_Os01g71310 | Os01g0940000 | CKX4, OsCKX4, ckx4, OsSCRM, OsSCRM2, SCRM, SCRM2 | Detail |
| C1H1g08967 | 1:36,817,457-36,823,509 | - | C2H1g01876 | CX1g004002 | LOC_Os01g71320 | Os01g0940100 | - | Detail |
| C1H1g04585 | 1:36,844,904-36,845,442 | + | C2H1g06863 | CX1g006883 | LOC_Os01g71330 | Os01g0940600 | - | Detail |
| C1H1g16091 | 1:36,848,582-36,850,305 | + | C2H1g01858 | CX1g000254 | LOC_Os01g71340 | Os01g0940700 | - | Detail |
| C1H1g10602 | 1:36,851,597-36,852,899 | + | C2H1g03308 | CX1g000254 | LOC_Os01g71350 | Os01g0940800 | Gns6 | Detail |
| C1H1g11005 | 1:36,857,741-36,858,706 | + | C2H1g25094 | CX1g000254 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| C1H1g17272 | 1:36,866,819-36,867,937 | + | C2H1g16744 | CX1g000254 | LOC_Os01g71410 | Os01g0941500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026067 | 3:24,465,845-24,466,534 | - | C1H3g28997 | C2H3g20889 | LOC_Os03g46070 | Os03g0663500 | - | Detail |
| CX3g030773 | 3:24,490,882-24,494,042 | + | C1H3g12643 | C2H3g27587 | LOC_Os03g46090 | Os03g0663700 | - | Detail |
| CX3g031226 | 3:24,497,352-24,499,469 | - | C1H3g29144 | C2H3g16281 | LOC_Os03g46100 | Os03g0663800 | FLOC1 | Detail |
| CX3g026799 | 3:24,500,581-24,502,979 | - | C1H3g10937 | C2H3g05304 | LOC_Os03g46110 | Os03g0663900 | EPAD1 | Detail |
| CX3g027937 | 3:24,507,307-24,513,532 | + | C1H3g22844 | C2H3g13262 | LOC_Os03g46140 | Os03g0664300 | - | Detail |
| CX3g030100 | 3:24,514,269-24,515,005 | + | C1H3g22844 | C2H3g03743 | LOC_Os03g46150 | Os03g0664400 | - | Detail |
| CX3g026593 | 3:24,522,034-24,522,816 | + | C1H3g05960 | C2H3g25255 | LOC_Os03g46180 | Os03g0664600 | - | Detail |
| CX3g028782 | 3:24,523,828-24,526,469 | - | C1H3g08349 | C2H3g30526 | LOC_Os03g46190 | Os03g0664700 | - | Detail |
| CX3g030949 | 3:24,526,671-24,527,378 | + | C1H3g19227 | C2H3g29200 | LOC_Os03g46200 | Os03g0664800 | - | Detail |
| CX3g028453 | 3:24,534,953-24,535,893 | + | C1H3g19227 | C2H3g29200 | LOC_Os03g46250 | Os03g0665000 | - | Detail |
| CX3g028439 | 3:24,538,212-24,540,654 | - | C1H3g03624 | C2H3g13481 | LOC_Os03g46260 | Os03g0665200 | OsFLZ11 | Detail |
| CX3g025809 | 3:24,568,980-24,569,327 | + | C1H3g16143 | C2H3g01208 | LOC_Os03g46300 | Os03g0665700 | - | Detail |
| CX3g030454 | 3:24,574,222-24,577,129 | + | C1H3g02596 | C2H3g02010 | LOC_Os03g46310 | Os03g0665800 | - | Detail |
| CX3g030422 | 3:24,582,231-24,588,605 | + | C1H3g06192 | C2H3g24958 | LOC_Os03g46330 | Os03g0666100 | - | Detail |
| CX3g025831 | 3:24,589,210-24,592,713 | - | C1H3g26270 | C2H3g06923 | LOC_Os03g46340 | Os03g0666200 | OsSWAP70A | Detail |
| CX3g029931 | 3:24,598,036-24,599,158 | + | C1H3g10336 | C2H3g08439 | LOC_Os03g46350 | Os03g0666300 | - | Detail |
| CX3g027340 | 3:24,608,622-24,612,023 | + | C1H3g06798 | C2H3g02623 | LOC_Os03g46390 | Os03g0666500 | - | Detail |
| CX3g026425 | 3:24,615,404-24,618,001 | - | C1H3g03865 | C2H3g22843 | LOC_Os03g46410 | Os03g0666700 | - | Detail |
| CX3g029763 | 3:24,622,917-24,623,252 | + | - | - | - | Os03g0666800 | - | Detail |
| CX3g026086 | 3:24,628,705-24,631,260 | - | C1H3g13561 | C2H3g09706 | LOC_Os03g46440 | Os03g0667100 | - | Detail |