| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17879 | 2:8,415,095-8,417,968 | - | C2H2g08854 | CX2g020140 | LOC_Os02g15760 | Os02g0257500 | OsSPCH2 | Detail |
| C1H2g13138 | 2:8,440,752-8,440,994 | - | - | - | - | - | - | Detail |
| C1H2g10499 | 2:8,450,606-8,455,969 | - | - | - | LOC_Os02g15790 | - | - | Detail |
| C1H2g24912 | 2:8,460,479-8,460,907 | + | - | CX2g019754 | LOC_Os02g15800 | Os02g0258000 | - | Detail |
| C1H2g08552 | 2:8,479,979-8,481,684 | - | C2H2g26210 | CX2g020807 | LOC_Os02g15810 | Os02g0258200 | - | Detail |
| C1H2g19748 | 2:8,482,646-8,483,071 | + | C2H1g29748 | CX2g022355 | - | Os02g0187700 | Os2R_MYB22 | Detail |
| C1H2g01345 | 2:8,484,414-8,489,802 | - | C2H2g14268 | CX2g021130 | LOC_Os02g15820 | Os02g0258300 | - | Detail |
| C1H2g29798 | 2:8,513,049-8,513,324 | + | C2H2g28678 | CX2g024305 | LOC_Os02g15860 | Os02g0258800 | - | Detail |
| C1H2g20084 | 2:8,516,059-8,519,540 | - | C2H2g14628 | CX2g022221 | LOC_Os02g15870 | Os02g0258900 | - | Detail |
| C1H2g13918 | 2:8,522,755-8,524,650 | - | - | CX2g020163 | LOC_Os02g15880 | Os02g0259100 | - | Detail |
| C1H2g15544 | 2:8,543,405-8,545,255 | - | C2H2g14089 | CX2g024280 | LOC_Os02g15900 | Os02g0259600 | - | Detail |
| C1H2g10789 | 2:8,551,763-8,552,161 | + | - | - | - | - | - | Detail |
| C1H2g04256 | 2:8,554,093-8,560,341 | + | C2H2g22829 | CX2g024539 | LOC_Os02g15930 | Os02g0259850 | - | Detail |
| C1H2g03338 | 2:8,578,273-8,580,594 | + | C2H2g09217 | CX2g022291 | LOC_Os02g15950 | Os02g0260200 | EP3, LP | Detail |
| C1H2g02864 | 2:8,601,861-8,605,657 | - | C2H2g12926 | CX2g021533 | LOC_Os02g15970 | Os02g0260400 | - | Detail |
| C1H2g27751 | 2:8,614,036-8,617,836 | + | C2H2g06594 | CX2g022911 | LOC_Os02g15980 | Os02g0260500 | - | Detail |
| C1H2g12308 | 2:8,623,315-8,628,321 | + | C2H2g13675 | CX2g024506 | LOC_Os02g16000 | Os02g0260700 | - | Detail |
| C1H2g28079 | 2:8,636,613-8,640,704 | + | C2H2g11255 | CX2g022743 | LOC_Os02g16030 | Os02g0261000 | - | Detail |
| C1H2g29991 | 2:8,644,610-8,649,650 | + | C2H2g01960 | CX2g019327 | LOC_Os02g16040 | Os02g0261100 | UBC5B, OsUBC5b, OsUBC15, UBC15 | Detail |
| C1H2g07409 | 2:8,669,727-8,671,447 | + | C2H2g29016 | CX2g022234 | LOC_Os02g16270 | Os02g0262800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025030 | 3:23,942,169-23,945,276 | - | - | - | LOC_Os03g44890 | Os03g0652000 | - | Detail |
| CX3g027235 | 3:23,949,621-23,960,317 | + | C1H3g29368 | C2H3g03221 | LOC_Os03g44900 | Os03g0652100 | - | Detail |
| CX3g031191 | 3:23,962,126-23,962,572 | - | C1H3g01838 | C2H3g22550 | - | - | - | Detail |
| CX3g029701 | 3:23,962,988-23,966,799 | - | C1H3g27711 | C2H3g13262 | LOC_Os03g44920 | Os03g0653100 | - | Detail |
| CX3g030705 | 3:23,976,827-23,979,004 | - | C1H3g17818 | C2H3g20973 | LOC_Os03g44950 | - | - | Detail |
| CX3g025146 | 3:23,991,986-23,992,373 | - | - | - | - | Os03g0779300 | - | Detail |
| CX3g027363 | 3:23,992,988-23,993,164 | + | - | - | - | Os12g0568166 | - | Detail |
| CX3g029402 | 3:23,994,095-23,995,639 | + | C1H3g27711 | C2H3g13262 | LOC_Os03g44920 | Os03g0653100 | - | Detail |
| CX3g027629 | 3:24,010,012-24,015,866 | - | C1H3g02859 | C2H3g17941 | LOC_Os03g45120 | Os03g0653900 | - | Detail |
| CX3g030316 | 3:24,018,552-24,018,734 | - | - | - | LOC_Os02g18910 | - | - | Detail |
| CX3g027623 | 3:24,038,051-24,038,251 | + | - | - | - | - | - | Detail |
| CX3g027165 | 3:24,044,245-24,049,505 | - | C1H3g07189 | C2H3g06696 | LOC_Os03g45170 | Os03g0654400 | - | Detail |
| CX3g029174 | 3:24,052,641-24,057,361 | - | C1H3g30470 | C2H3g22615 | LOC_Os03g45180 | Os03g0654500 | - | Detail |
| CX3g031252 | 3:24,058,072-24,059,533 | - | C1H3g08581 | C2H3g20364 | LOC_Os03g45194 | Os03g0325500 | - | Detail |
| CX3g030732 | 3:24,060,822-24,065,609 | - | C1H3g11388 | C2H3g01388 | LOC_Os03g45194 | Os03g0654600 | NOL | Detail |
| CX3g028229 | 3:24,067,145-24,070,249 | - | C1H3g21434 | C2H3g20432 | LOC_Os03g45210 | Os03g0654700 | - | Detail |
| CX3g027998 | 3:24,081,183-24,081,347 | - | - | - | - | - | - | Detail |
| CX3g030222 | 3:24,082,379-24,083,750 | + | C1H3g03001 | C2H3g04155 | LOC_Os03g45250 | Os03g0655100 | - | Detail |
| CX3g026925 | 3:24,089,486-24,093,013 | - | C1H3g21386 | C2H3g05571 | LOC_Os03g45260 | Os03g0655200 | - | Detail |
| CX3g028778 | 3:24,094,789-24,095,614 | + | C1H3g23268 | C2H3g24615 | LOC_Os03g45270 | Os03g0655300 | - | Detail |