| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g21298 | 5:24,370,851-24,378,723 | + | C1H5g11375 | CX5g040394 | LOC_Os05g50660 | Os05g0583500 | - | Detail |
| C2H5g22702 | 5:24,384,080-24,385,033 | + | C1H5g12339 | CX5g040044 | LOC_Os05g44090 | Os05g0583600 | - | Detail |
| C2H5g01078 | 5:24,388,586-24,389,818 | - | C1H5g13782 | CX5g040015 | LOC_Os05g50690 | Os05g0583950 | - | Detail |
| C2H5g06430 | 5:24,392,259-24,393,420 | + | C1H5g25754 | CX5g040625 | LOC_Os05g50700 | Os05g0183100 | OsWRKY67 | Detail |
| C2H5g22409 | 5:24,395,708-24,396,278 | - | C1H5g23722 | CX5g038552 | LOC_Os05g50710 | Os05g0584200 | - | Detail |
| C2H5g01350 | 5:24,397,473-24,398,219 | + | C1H5g29939 | CX5g037414 | LOC_Os05g50720 | Os05g0584300 | - | Detail |
| C2H5g11315 | 5:24,403,610-24,404,565 | - | C1H5g06457 | CX5g040723 | LOC_Os05g50730 | Os05g0584400 | - | Detail |
| C2H5g01570 | 5:24,409,676-24,414,803 | - | C1H5g14305 | CX5g037383 | LOC_Os05g50750 | Os05g0584600 | - | Detail |
| C2H5g08711 | 5:24,442,120-24,444,358 | + | C1H5g05102 | CX5g039086 | LOC_Os05g50770 | Os05g0584900 | - | Detail |
| C2H5g19125 | 5:24,451,398-24,453,724 | + | C1H5g03901 | CX5g036814 | LOC_Os05g50800 | Os05g0585400 | - | Detail |
| C2H5g30392 | 5:24,454,334-24,458,461 | - | C1H5g16468 | CX5g039624 | LOC_Os05g50810 | Os05g0585500 | OsCPK15 | Detail |
| C2H5g27655 | 5:24,460,511-24,461,197 | + | C1H5g19912 | - | LOC_Os05g50815 | Os05g0580900 | - | Detail |
| C2H5g10246 | 5:24,463,816-24,466,422 | - | C1H5g12424 | CX5g039076 | LOC_Os05g50820 | Os05g0585700 | - | Detail |
| C2H5g21671 | 5:24,469,908-24,471,983 | + | C1H5g08867 | CX5g037322 | LOC_Os05g50830 | Os05g0585800 | - | Detail |
| C2H5g07511 | 5:24,472,142-24,476,832 | - | C1H5g02224 | CX5g039391 | LOC_Os05g50840 | Os05g0585900 | - | Detail |
| C2H5g12537 | 5:24,499,027-24,504,297 | + | C1H5g05725 | CX5g037391 | LOC_Os05g50890 | Os05g0586200 | OsGH3-5, OsGH3.5, OsJAR1, JAR1 | Detail |
| C2H5g22033 | 5:24,507,189-24,509,328 | - | C1H5g23433 | CX5g040329 | LOC_Os05g50900 | Os05g0586300 | OsFAMA | Detail |
| C2H5g28495 | 5:24,513,017-24,518,798 | + | C1H5g03676 | CX5g037684 | LOC_Os05g50910 | Os05g0586400 | - | Detail |
| C2H5g17335 | 5:24,520,464-24,523,154 | + | C1H5g31726 | CX5g037746 | LOC_Os05g50920 | Os05g0586500 | - | Detail |
| C2H5g13829 | 5:24,524,099-24,528,487 | + | C1H5g23972 | CX5g037636 | LOC_Os05g50940 | Os05g0586700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029288 | 3:23,615,616-23,616,401 | - | C1H3g01932 | C2H3g09347 | LOC_Os03g44450 | Os03g0646400 | - | Detail |
| CX3g025480 | 3:23,620,985-23,628,787 | + | C1H3g04677 | C2H3g17378 | LOC_Os03g44484 | Os03g0646800 | - | Detail |
| CX3g030610 | 3:23,630,310-23,638,072 | - | C1H3g15319 | C2H3g09600 | LOC_Os03g44500 | Os03g0646900 | OsPPKL1, GL3.1 | Detail |
| CX3g026267 | 3:23,643,206-23,643,670 | - | - | - | - | - | - | Detail |
| CX3g025993 | 3:23,648,861-23,649,448 | + | - | - | LOC_Os03g44520 | Os03g0647400 | - | Detail |
| CX3g028021 | 3:23,650,683-23,654,082 | - | C1H3g31672 | C2H3g20933 | LOC_Os03g44530 | Os03g0647500 | - | Detail |
| CX3g025465 | 3:23,657,406-23,662,803 | - | C1H3g00783 | C2H3g08581 | LOC_Os03g44540 | Os03g0647600 | OsNF-YA3, HAP2H | Detail |
| CX3g030972 | 3:23,667,023-23,667,196 | + | - | - | - | - | - | Detail |
| CX3g026616 | 3:23,678,457-23,681,709 | - | C1H3g28506 | C2H3g28034 | LOC_Os03g44560 | Os03g0647800 | - | Detail |
| CX3g029626 | 3:23,682,198-23,683,115 | + | - | - | - | - | - | Detail |
| CX3g030626 | 3:23,686,753-23,687,841 | - | C1H3g02569 | C2H3g30622 | LOC_Os03g44580 | Os03g0648100 | - | Detail |
| CX3g026899 | 3:23,696,380-23,702,734 | - | C1H3g04139 | C2H3g20748 | LOC_Os03g44610 | Os03g0648300 | - | Detail |
| CX3g030255 | 3:23,707,644-23,710,797 | + | C1H3g01950 | C2H3g20479 | LOC_Os03g44620 | Os03g0648400 | - | Detail |
| CX3g030166 | 3:23,711,390-23,711,935 | - | C1H3g13484 | C2H3g07590 | LOC_Os03g44630 | Os03g0648500 | - | Detail |
| CX3g026795 | 3:23,726,156-23,726,686 | + | C1H3g07849 | C2H3g07473 | LOC_Os03g44636 | Os03g0648600 | - | Detail |
| CX3g026344 | 3:23,731,031-23,732,029 | + | - | - | - | - | - | Detail |
| CX3g030053 | 3:23,734,337-23,737,754 | + | C1H3g12327 | C2H3g02590 | LOC_Os03g44660 | Os03g0648900 | - | Detail |
| CX3g030188 | 3:23,739,796-23,742,979 | - | C1H3g07360 | C2H3g08448 | LOC_Os03g44670 | Os03g0649000 | - | Detail |
| CX3g028790 | 3:23,762,428-23,765,436 | + | C1H3g11970 | C2H3g18182 | - | - | - | Detail |
| CX3g025229 | 3:23,811,787-23,813,796 | + | C1H3g26338 | C2H3g15030 | LOC_Os03g45300 | Os03g0164400 | - | Detail |