| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g30081 | 12:6,152,106-6,159,939 | + | C2H12g20758 | CX12g016278 | LOC_Os12g13460 | Os12g0236900 | - | Detail |
| C1H12g28894 | 12:6,200,952-6,204,913 | + | C2H12g22982 | CX12g015143 | LOC_Os12g13550 | Os12g0237900 | - | Detail |
| C1H12g07915 | 12:6,210,331-6,219,228 | - | C2H12g23099 | CX12g015709 | LOC_Os12g13570 | Os12g0238000 | Os2R_MYB95 | Detail |
| C1H12g03439 | 12:6,231,519-6,245,121 | - | C2H12g29683 | CX12g017469 | LOC_Os12g13590 | Os12g0238100 | - | Detail |
| C1H12g12973 | 12:6,246,499-6,247,360 | - | C2H12g20204 | - | - | - | - | Detail |
| C1H12g05362 | 12:6,248,550-6,248,792 | - | C2H12g20204 | - | - | - | - | Detail |
| C1H12g28094 | 12:6,263,057-6,271,613 | + | C2H12g00674 | CX12g018069 | LOC_Os12g13640 | Os12g0238900 | - | Detail |
| C1H12g18734 | 12:6,295,358-6,296,327 | + | - | - | - | - | - | Detail |
| C1H12g23331 | 12:6,317,011-6,337,797 | - | C2H12g28113 | CX12g015652 | LOC_Os12g13660 | Os12g0239000 | - | Detail |
| C1H12g12697 | 12:6,348,837-6,349,109 | + | C2H12g21094 | CX12g017586 | - | Os07g0631500 | - | Detail |
| C1H12g15431 | 12:6,364,580-6,370,519 | - | C2H12g02650 | CX12g018347 | LOC_Os12g13720 | Os12g0239900 | - | Detail |
| C1H12g20502 | 12:6,371,098-6,373,093 | - | C2H12g23184 | CX12g018347 | LOC_Os12g13720 | Os12g0512700 | OsABCG50, OsPDR23, OsABCG50/PDR23 | Detail |
| C1H12g22587 | 12:6,375,285-6,376,344 | - | C2H12g05703 | - | - | - | - | Detail |
| C1H12g22302 | 12:6,428,051-6,432,963 | - | C2H12g12555 | CX12g016768 | LOC_Os12g13824 | Os12g0241100 | - | Detail |
| C1H12g10883 | 12:6,470,752-6,471,531 | - | C2H12g06713 | CX12g017347 | LOC_Os12g13890 | Os12g0242100 | - | Detail |
| C1H12g02106 | 12:6,474,510-6,475,333 | - | C2H12g28896 | CX12g016285 | LOC_Os12g13900 | Os12g0242200 | - | Detail |
| C1H12g25237 | 12:6,474,921-6,475,135 | + | - | - | - | - | - | Detail |
| C1H12g14554 | 12:6,486,100-6,487,107 | + | C2H12g16020 | CX12g016093 | LOC_Os12g13910 | Os12g0242500 | - | Detail |
| C1H12g01819 | 12:6,498,688-6,501,856 | + | C2H12g27977 | CX12g015195 | LOC_Os12g13930 | Os12g0242700 | - | Detail |
| C1H12g02837 | 12:6,505,323-6,510,014 | - | C2H12g19112 | CX12g016080 | LOC_Os12g13950 | Os12g0242900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029288 | 3:23,615,616-23,616,401 | - | C1H3g01932 | C2H3g09347 | LOC_Os03g44450 | Os03g0646400 | - | Detail |
| CX3g025480 | 3:23,620,985-23,628,787 | + | C1H3g04677 | C2H3g17378 | LOC_Os03g44484 | Os03g0646800 | - | Detail |
| CX3g030610 | 3:23,630,310-23,638,072 | - | C1H3g15319 | C2H3g09600 | LOC_Os03g44500 | Os03g0646900 | OsPPKL1, GL3.1 | Detail |
| CX3g026267 | 3:23,643,206-23,643,670 | - | - | - | - | - | - | Detail |
| CX3g025993 | 3:23,648,861-23,649,448 | + | - | - | LOC_Os03g44520 | Os03g0647400 | - | Detail |
| CX3g028021 | 3:23,650,683-23,654,082 | - | C1H3g31672 | C2H3g20933 | LOC_Os03g44530 | Os03g0647500 | - | Detail |
| CX3g025465 | 3:23,657,406-23,662,803 | - | C1H3g00783 | C2H3g08581 | LOC_Os03g44540 | Os03g0647600 | OsNF-YA3, HAP2H | Detail |
| CX3g030972 | 3:23,667,023-23,667,196 | + | - | - | - | - | - | Detail |
| CX3g026616 | 3:23,678,457-23,681,709 | - | C1H3g28506 | C2H3g28034 | LOC_Os03g44560 | Os03g0647800 | - | Detail |
| CX3g029626 | 3:23,682,198-23,683,115 | + | - | - | - | - | - | Detail |
| CX3g030626 | 3:23,686,753-23,687,841 | - | C1H3g02569 | C2H3g30622 | LOC_Os03g44580 | Os03g0648100 | - | Detail |
| CX3g026899 | 3:23,696,380-23,702,734 | - | C1H3g04139 | C2H3g20748 | LOC_Os03g44610 | Os03g0648300 | - | Detail |
| CX3g030255 | 3:23,707,644-23,710,797 | + | C1H3g01950 | C2H3g20479 | LOC_Os03g44620 | Os03g0648400 | - | Detail |
| CX3g030166 | 3:23,711,390-23,711,935 | - | C1H3g13484 | C2H3g07590 | LOC_Os03g44630 | Os03g0648500 | - | Detail |
| CX3g026795 | 3:23,726,156-23,726,686 | + | C1H3g07849 | C2H3g07473 | LOC_Os03g44636 | Os03g0648600 | - | Detail |
| CX3g026344 | 3:23,731,031-23,732,029 | + | - | - | - | - | - | Detail |
| CX3g030053 | 3:23,734,337-23,737,754 | + | C1H3g12327 | C2H3g02590 | LOC_Os03g44660 | Os03g0648900 | - | Detail |
| CX3g030188 | 3:23,739,796-23,742,979 | - | C1H3g07360 | C2H3g08448 | LOC_Os03g44670 | Os03g0649000 | - | Detail |
| CX3g028790 | 3:23,762,428-23,765,436 | + | C1H3g11970 | C2H3g18182 | - | - | - | Detail |
| CX3g025229 | 3:23,811,787-23,813,796 | + | C1H3g26338 | C2H3g15030 | LOC_Os03g45300 | Os03g0164400 | - | Detail |