| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g21742 | 12:7,953,738-7,957,203 | - | C1H12g23481 | CX12g016666 | LOC_Os12g16250 | Os12g0263600 | - | Detail |
| C2H12g09837 | 12:7,965,840-7,966,673 | - | C1H12g19638 | CX12g016756 | - | - | - | Detail |
| C2H12g28081 | 12:7,968,856-7,969,194 | + | - | CX12g018545 | LOC_Os02g35120 | Os06g0629362 | - | Detail |
| C2H12g05917 | 12:7,982,822-7,985,891 | - | C1H12g31185 | CX12g016907 | LOC_Os12g16520 | Os12g0614851 | - | Detail |
| C2H12g24177 | 12:7,993,537-7,994,355 | - | C1H12g05455 | CX12g018590 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C2H12g24213 | 12:7,994,387-7,995,226 | - | C1H12g12669 | CX12g016989 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C2H12g15577 | 12:8,037,335-8,039,673 | + | C1H12g30337 | CX12g015656 | - | - | - | Detail |
| C2H12g13855 | 12:8,065,465-8,065,944 | - | - | CX12g015139 | - | - | - | Detail |
| C2H12g13804 | 12:8,066,709-8,067,195 | + | C1H12g12690 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C2H12g25263 | 12:8,070,111-8,081,634 | + | C1H12g04576 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C2H12g29205 | 12:8,085,928-8,086,371 | + | C1H12g26358 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C2H12g22341 | 12:8,096,868-8,097,109 | + | C1H12g24303 | CX12g017950 | LOC_Os12g16370 | - | - | Detail |
| C2H12g01086 | 12:8,101,650-8,104,551 | + | C1H12g20439 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C2H12g04535 | 12:8,117,029-8,118,986 | - | C1H12g24834 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C2H12g04709 | 12:8,195,949-8,200,053 | - | C1H12g27646 | CX12g016443 | LOC_Os12g17070 | Os12g0270100 | - | Detail |
| C2H12g27718 | 12:8,205,451-8,207,208 | + | C1H12g23758 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C2H12g03089 | 12:8,213,300-8,218,084 | - | C1H12g00865 | CX12g016852 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C2H12g11132 | 12:8,238,815-8,241,615 | - | C1H12g07805 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C2H12g14706 | 12:8,247,114-8,250,863 | - | C1H12g17449 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| C2H12g04129 | 12:8,266,886-8,267,263 | - | - | CX12g018058 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026386 | 3:22,816,033-22,817,457 | + | - | - | - | - | - | Detail |
| CX3g027895 | 3:22,831,132-22,831,284 | - | - | - | - | Os09g0414600 | - | Detail |
| CX3g025138 | 3:22,839,362-22,839,844 | - | - | - | - | - | - | Detail |
| CX3g027002 | 3:22,841,486-22,848,087 | - | C1H3g04577 | C2H3g22195 | LOC_Os03g43470 | Os03g0635000 | - | Detail |
| CX3g028287 | 3:22,870,731-22,876,415 | - | C1H3g10790 | C2H3g22456 | LOC_Os03g43510 | Os03g0635800 | - | Detail |
| CX3g027880 | 3:22,885,581-22,885,874 | + | - | - | - | - | - | Detail |
| CX3g027824 | 3:22,905,132-22,905,545 | - | - | - | - | - | - | Detail |
| CX3g025345 | 3:22,932,293-22,932,820 | + | - | - | LOC_Os09g14930 | - | - | Detail |
| CX3g025120 | 3:22,935,641-22,936,186 | - | - | - | LOC_Os03g45000 | - | - | Detail |
| CX3g030894 | 3:22,942,244-22,945,282 | + | C1H3g22885 | C2H3g15270 | LOC_Os03g43570 | Os09g0401600 | - | Detail |
| CX3g030114 | 3:22,948,438-22,949,980 | + | C1H3g28970 | C2H3g21892 | LOC_Os03g43580 | Os03g0636700 | - | Detail |
| CX3g028317 | 3:22,953,121-22,957,017 | - | C1H3g09456 | C2H3g10602 | LOC_Os03g43590 | Os03g0636800 | - | Detail |
| CX3g030500 | 3:22,964,103-22,964,321 | + | - | - | - | - | - | Detail |
| CX3g029103 | 3:22,984,545-22,984,937 | + | - | - | - | - | - | Detail |
| CX3g027394 | 3:22,991,398-22,992,558 | - | C1H3g19476 | C2H3g03262 | LOC_Os03g43650 | Os03g0637600 | - | Detail |
| CX3g027391 | 3:23,002,965-23,005,595 | + | C1H3g17802 | C2H3g26963 | LOC_Os03g43670 | Os03g0637800 | OsCR4, MIS2 | Detail |
| CX3g029790 | 3:23,011,133-23,017,613 | - | C1H3g08726 | C2H3g21555 | LOC_Os03g43684 | Os03g0637900 | - | Detail |
| CX3g028463 | 3:23,039,267-23,042,280 | + | C1H3g11114 | C2H3g25520 | LOC_Os03g43720 | Os03g0638200 | - | Detail |
| CX3g029266 | 3:23,044,157-23,048,231 | - | C1H3g15945 | C2H3g16047 | LOC_Os03g43730 | Os03g0638300 | - | Detail |
| CX3g026087 | 3:23,062,559-23,066,422 | + | C1H3g27096 | C2H3g25175 | LOC_Os03g43760 | Os03g0638800 | - | Detail |