| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g26497 | 4:3,214,424-3,216,214 | - | C2H4g08785 | CX4g033688 | LOC_Os04g08290 | Os04g0165200 | ART2 | Detail |
| C1H4g15929 | 4:3,222,135-3,223,120 | + | - | CX4g033043 | LOC_Os04g08310 | Os04g0165300 | - | Detail |
| C1H4g20789 | 4:3,226,239-3,228,095 | - | C2H4g02342 | CX4g035325 | LOC_Os04g08320 | Os04g0165400 | - | Detail |
| C1H4g12785 | 4:3,230,389-3,230,700 | - | C2H4g19422 | CX4g035853 | LOC_Os04g08330 | Os04g0165500 | - | Detail |
| C1H4g31381 | 4:3,245,804-3,247,931 | + | C2H4g06874 | CX4g036241 | LOC_Os04g08340 | Os04g0165600 | - | Detail |
| C1H4g30280 | 4:3,250,393-3,254,434 | - | C2H4g04495 | CX4g034083 | LOC_Os04g08350 | Os04g0165700 | - | Detail |
| C1H4g18120 | 4:3,262,917-3,265,964 | - | C2H4g24204 | CX4g034989 | LOC_Os04g08390 | Os04g0166000 | - | Detail |
| C1H4g16596 | 4:3,291,349-3,296,428 | - | C2H4g25306 | CX4g036344 | LOC_Os04g08410 | Os04g0166400 | - | Detail |
| C1H4g13488 | 4:3,322,176-3,326,018 | + | C2H4g16904 | CX4g036063 | LOC_Os04g08450 | Os04g0166600 | OsSFL1 | Detail |
| C1H4g11999 | 4:3,334,056-3,336,300 | + | C2H4g26054 | CX4g033810 | LOC_Os04g08460 | - | - | Detail |
| C1H4g21471 | 4:3,370,486-3,373,209 | - | C2H4g21134 | CX4g033225 | LOC_Os04g08550 | Os04g0167800 | - | Detail |
| C1H4g06121 | 4:3,377,126-3,378,118 | - | C2H4g04423 | CX4g034291 | - | Os04g0167875 | - | Detail |
| C1H4g27562 | 4:3,381,940-3,384,383 | - | C2H4g12568 | CX4g034291 | - | Os04g0167900 | - | Detail |
| C1H4g05004 | 4:3,385,590-3,386,226 | - | C2H4g02316 | CX4g032052 | LOC_Os04g08570 | Os04g0168000 | - | Detail |
| C1H4g17104 | 4:3,407,004-3,407,471 | - | - | CX4g034069 | LOC_Os04g08600 | Os04g0168100 | SRO | Detail |
| C1H4g08725 | 4:3,467,959-3,468,944 | - | - | CX4g036254 | LOC_Os04g08730 | - | - | Detail |
| C1H4g12046 | 4:3,475,828-3,479,747 | + | C2H4g13508 | CX4g033888 | LOC_Os04g08740 | Os04g0169100 | ETR2, OsETR2, OS-ETR2, etr2, OsPK1, PK1, ERL1, OsERL1, OsERS3 | Detail |
| C1H4g26213 | 4:3,498,442-3,500,124 | - | C2H4g19627 | CX4g036277 | LOC_Os04g08764 | Os04g0169500 | - | Detail |
| C1H4g05807 | 4:3,567,302-3,569,530 | + | C2H4g04047 | CX4g034654 | LOC_Os04g08824 | Os04g0171600 | - | Detail |
| C1H4g06403 | 4:3,573,267-3,577,599 | + | C2H4g27784 | CX4g031382 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025679 | 3:22,128,036-22,141,341 | - | C1H3g10684 | C2H3g04177 | LOC_Os03g42050 | Os03g0616700 | - | Detail |
| CX3g025331 | 3:22,152,213-22,152,407 | - | - | - | - | - | - | Detail |
| CX3g029696 | 3:22,173,439-22,173,693 | + | C1H3g29791 | - | - | - | - | Detail |
| CX3g029365 | 3:22,178,516-22,179,982 | - | C1H3g02090 | C2H3g24758 | LOC_Os03g42070 | Os03g0617500 | - | Detail |
| CX3g025139 | 3:22,206,618-22,207,981 | - | C1H3g10116 | C2H3g22270 | LOC_Os03g42100 | Os03g0205300 | - | Detail |
| CX3g028127 | 3:22,211,815-22,215,615 | - | C1H3g25739 | C2H3g20240 | LOC_Os03g42110 | Os03g0617900 | - | Detail |
| CX3g029440 | 3:22,236,178-22,236,630 | + | - | - | - | - | - | Detail |
| CX3g025773 | 3:22,238,343-22,240,081 | - | C1H3g17864 | C2H3g19029 | LOC_Os03g42130 | Os03g0618300 | - | Detail |
| CX3g026298 | 3:22,253,142-22,253,912 | - | C1H3g20662 | C2H3g10703 | LOC_Os03g42200 | Os03g0619151 | - | Detail |
| CX3g029634 | 3:22,268,033-22,271,330 | + | C1H3g03687 | C2H3g03302 | LOC_Os03g42220 | Os03g0619400 | - | Detail |
| CX3g025866 | 3:22,294,378-22,294,890 | - | - | - | LOC_Os03g42259 | Os03g0619875 | - | Detail |
| CX3g027401 | 3:22,306,568-22,306,750 | - | - | - | - | Os02g0188201 | - | Detail |
| CX3g028574 | 3:22,319,048-22,321,018 | - | C1H3g12219 | C2H3g20166 | LOC_Os03g42320 | Os03g0620800 | - | Detail |
| CX3g028767 | 3:22,325,339-22,325,687 | - | - | - | - | - | - | Detail |
| CX3g028555 | 3:22,332,669-22,338,904 | + | C1H3g22508 | C2H3g02303 | LOC_Os03g42350 | Os03g0621400 | - | Detail |
| CX3g025711 | 3:22,345,870-22,361,539 | + | C1H3g27507 | C2H3g03230 | LOC_Os03g42410 | Os03g0621900 | - | Detail |
| CX3g026756 | 3:22,368,457-22,375,041 | + | C1H3g24168 | C2H3g25799 | LOC_Os03g42420 | Os03g0622100 | - | Detail |
| CX3g029697 | 3:22,377,345-22,377,730 | - | C1H3g21229 | C2H3g07291 | LOC_Os03g42440 | Os03g0622600 | - | Detail |
| CX3g025485 | 3:22,400,287-22,400,994 | + | C1H3g29338 | C2H3g03196 | LOC_Os03g42520 | Os03g0623100 | - | Detail |
| CX3g027148 | 3:22,402,190-22,402,342 | - | - | - | - | - | - | Detail |