| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07505 | 1:27,069,405-27,071,903 | - | C2H1g28242 | CX1g000027 | LOC_Os01g52680 | Os01g0726400 | MADS32, OsMADS32, CFO1, CFO1/OsMADS32, TRI1 | Detail |
| C1H1g17040 | 1:27,082,701-27,085,207 | + | C2H1g03941 | CX1g007145 | LOC_Os01g52690 | Os01g0726700 | - | Detail |
| C1H1g01057 | 1:27,098,025-27,102,587 | + | C2H1g23381 | CX1g003909 | LOC_Os01g52710 | Os01g0727100 | - | Detail |
| C1H1g19246 | 1:27,105,488-27,108,168 | + | C2H1g19647 | CX1g005872 | LOC_Os01g52720 | Os01g0727400 | - | Detail |
| C1H1g12496 | 1:27,113,567-27,114,853 | - | C2H1g27626 | CX1g003015 | LOC_Os01g52740 | Os01g0727600 | - | Detail |
| C1H1g13959 | 1:27,118,903-27,119,406 | - | C2H1g06165 | CX1g000031 | LOC_Os01g52750 | Os01g0727800 | - | Detail |
| C1H1g20367 | 1:27,119,512-27,121,598 | - | C2H1g06165 | CX1g000031 | LOC_Os01g52750 | Os01g0727800 | - | Detail |
| C1H1g10404 | 1:27,124,485-27,125,907 | - | C2H1g06165 | CX1g000031 | LOC_Os01g52750 | Os01g0727840 | - | Detail |
| C1H1g03195 | 1:27,128,417-27,129,954 | + | C2H1g10283 | CX1g000775 | LOC_Os01g52760 | Os01g0727900 | - | Detail |
| C1H1g13378 | 1:27,138,484-27,140,735 | + | C2H1g05247 | CX1g000699 | LOC_Os01g52770 | Os01g0728100 | - | Detail |
| C1H1g24144 | 1:27,140,932-27,142,061 | - | C2H1g01766 | CX1g005271 | LOC_Os01g52780 | Os01g0728150 | - | Detail |
| C1H1g11513 | 1:27,143,019-27,147,174 | - | C2H1g04992 | CX1g006621 | LOC_Os01g52780 | Os01g0728200 | - | Detail |
| C1H1g29225 | 1:27,149,280-27,153,310 | - | C2H1g21067 | CX1g001354 | LOC_Os01g52790 | Os01g0728300 | - | Detail |
| C1H1g27738 | 1:27,157,771-27,158,620 | - | C2H1g25878 | CX1g001403 | LOC_Os01g52830 | Os01g0728700 | - | Detail |
| C1H1g16764 | 1:27,162,572-27,165,978 | + | C2H1g00719 | CX1g004662 | LOC_Os01g52864 | Os01g0729100 | - | Detail |
| C1H1g29905 | 1:27,173,356-27,173,661 | - | C2H1g01846 | - | LOC_Os01g52890 | Os01g0729500 | - | Detail |
| C1H1g29198 | 1:27,173,986-27,175,929 | - | C2H1g01846 | CX1g001938 | LOC_Os01g52900 | Os01g0729600 | - | Detail |
| C1H1g12193 | 1:27,195,510-27,199,937 | + | C2H1g03641 | CX1g002816 | LOC_Os01g52920 | Os01g0729900 | - | Detail |
| C1H1g12702 | 1:27,201,699-27,203,286 | - | C2H1g19584 | CX1g001631 | LOC_Os01g52970 | Os01g0730100 | - | Detail |
| C1H1g06718 | 1:27,205,939-27,207,714 | - | C2H1g18512 | CX1g000876 | LOC_Os01g52980 | Os01g0730200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025679 | 3:22,128,036-22,141,341 | - | C1H3g10684 | C2H3g04177 | LOC_Os03g42050 | Os03g0616700 | - | Detail |
| CX3g025331 | 3:22,152,213-22,152,407 | - | - | - | - | - | - | Detail |
| CX3g029696 | 3:22,173,439-22,173,693 | + | C1H3g29791 | - | - | - | - | Detail |
| CX3g029365 | 3:22,178,516-22,179,982 | - | C1H3g02090 | C2H3g24758 | LOC_Os03g42070 | Os03g0617500 | - | Detail |
| CX3g025139 | 3:22,206,618-22,207,981 | - | C1H3g10116 | C2H3g22270 | LOC_Os03g42100 | Os03g0205300 | - | Detail |
| CX3g028127 | 3:22,211,815-22,215,615 | - | C1H3g25739 | C2H3g20240 | LOC_Os03g42110 | Os03g0617900 | - | Detail |
| CX3g029440 | 3:22,236,178-22,236,630 | + | - | - | - | - | - | Detail |
| CX3g025773 | 3:22,238,343-22,240,081 | - | C1H3g17864 | C2H3g19029 | LOC_Os03g42130 | Os03g0618300 | - | Detail |
| CX3g026298 | 3:22,253,142-22,253,912 | - | C1H3g20662 | C2H3g10703 | LOC_Os03g42200 | Os03g0619151 | - | Detail |
| CX3g029634 | 3:22,268,033-22,271,330 | + | C1H3g03687 | C2H3g03302 | LOC_Os03g42220 | Os03g0619400 | - | Detail |
| CX3g025866 | 3:22,294,378-22,294,890 | - | - | - | LOC_Os03g42259 | Os03g0619875 | - | Detail |
| CX3g027401 | 3:22,306,568-22,306,750 | - | - | - | - | Os02g0188201 | - | Detail |
| CX3g028574 | 3:22,319,048-22,321,018 | - | C1H3g12219 | C2H3g20166 | LOC_Os03g42320 | Os03g0620800 | - | Detail |
| CX3g028767 | 3:22,325,339-22,325,687 | - | - | - | - | - | - | Detail |
| CX3g028555 | 3:22,332,669-22,338,904 | + | C1H3g22508 | C2H3g02303 | LOC_Os03g42350 | Os03g0621400 | - | Detail |
| CX3g025711 | 3:22,345,870-22,361,539 | + | C1H3g27507 | C2H3g03230 | LOC_Os03g42410 | Os03g0621900 | - | Detail |
| CX3g026756 | 3:22,368,457-22,375,041 | + | C1H3g24168 | C2H3g25799 | LOC_Os03g42420 | Os03g0622100 | - | Detail |
| CX3g029697 | 3:22,377,345-22,377,730 | - | C1H3g21229 | C2H3g07291 | LOC_Os03g42440 | Os03g0622600 | - | Detail |
| CX3g025485 | 3:22,400,287-22,400,994 | + | C1H3g29338 | C2H3g03196 | LOC_Os03g42520 | Os03g0623100 | - | Detail |
| CX3g027148 | 3:22,402,190-22,402,342 | - | - | - | - | - | - | Detail |