| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g28299 | 5:22,170,070-22,171,101 | - | C1H5g17231 | CX5g038315 | LOC_Os05g45710 | Os05g0533500 | OsSAT1;3 | Detail |
| C2H5g13260 | 5:22,173,794-22,181,115 | + | C1H5g17232 | CX5g039556 | LOC_Os05g45720 | Os05g0533600 | SSIVB, OsSSIVb, SSIV-2, OsSSIV-2, SSIVb, SSIV-2 | Detail |
| C2H5g03217 | 5:22,181,740-22,183,798 | + | C1H5g27858 | CX5g039089 | LOC_Os05g45730 | Os05g0533700 | - | Detail |
| C2H5g09746 | 5:22,184,871-22,186,393 | + | C1H5g22620 | CX5g038471 | LOC_Os05g45740 | Os05g0533800 | - | Detail |
| C2H5g27500 | 5:22,187,563-22,191,307 | + | C1H5g12717 | CX5g038527 | LOC_Os05g45750 | Os05g0533900 | - | Detail |
| C2H5g28882 | 5:22,191,750-22,193,669 | - | C1H5g28841 | CX5g040105 | LOC_Os05g45760 | Os05g0534000 | - | Detail |
| C2H5g06715 | 5:22,194,656-22,196,891 | + | C1H5g15352 | CX5g036728 | LOC_Os05g45770 | Os05g0534100 | - | Detail |
| C2H5g12404 | 5:22,208,576-22,210,028 | + | C1H5g21827 | CX5g040749 | LOC_Os05g45810 | Os05g0534400 | OsCBL4 | Detail |
| C2H5g20385 | 5:22,210,537-22,213,936 | - | C1H5g13213 | CX5g037499 | LOC_Os05g45820 | Os05g0534500 | - | Detail |
| C2H5g26781 | 5:22,216,968-22,222,503 | - | C1H5g03368 | CX5g039192 | LOC_Os05g45830 | Os05g0534600 | - | Detail |
| C2H5g01370 | 5:22,224,945-22,230,054 | + | C1H5g18942 | CX5g040022 | LOC_Os05g45840 | Os05g0534800 | - | Detail |
| C2H5g21069 | 5:22,231,206-22,233,860 | + | C1H5g12782 | CX5g037833 | LOC_Os05g45850 | Os05g0534900 | - | Detail |
| C2H5g29794 | 5:22,237,286-22,240,510 | - | C1H5g14563 | CX5g037747 | LOC_Os05g45860 | Os05g0535100 | - | Detail |
| C2H5g19676 | 5:22,242,023-22,242,482 | + | C1H5g01171 | - | - | - | - | Detail |
| C2H5g22490 | 5:22,243,519-22,244,341 | - | C1H5g05296 | CX5g040472 | LOC_Os01g52020 | Os07g0631500 | - | Detail |
| C2H5g10427 | 5:22,244,622-22,246,760 | + | C1H5g29728 | CX5g038811 | LOC_Os05g45870 | Os05g0535200 | - | Detail |
| C2H5g08565 | 5:22,249,637-22,250,592 | + | C1H5g30804 | CX5g038750 | LOC_Os05g45870 | Os05g0535300 | - | Detail |
| C2H5g18762 | 5:22,252,723-22,254,144 | - | - | - | - | - | - | Detail |
| C2H5g02857 | 5:22,255,846-22,261,277 | - | - | - | - | - | - | Detail |
| C2H5g19368 | 5:22,263,889-22,267,361 | + | C1H5g31590 | CX5g037476 | LOC_Os05g45880 | Os05g0535400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028784 | 3:21,608,323-21,608,496 | - | - | - | - | Os03g0606466 | - | Detail |
| CX3g031311 | 3:21,611,365-21,611,544 | - | - | - | - | Os02g0188201 | - | Detail |
| CX3g028911 | 3:21,618,849-21,619,244 | - | - | - | - | - | - | Detail |
| CX3g026651 | 3:21,621,431-21,621,703 | + | - | - | - | Os03g0824350 | - | Detail |
| CX3g030042 | 3:21,637,207-21,637,410 | + | - | - | LOC_Os03g01442 | Os03g0104800 | - | Detail |
| CX3g025127 | 3:21,641,274-21,643,745 | - | C1H3g29161 | C2H3g00163 | LOC_Os03g41064 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| CX3g026140 | 3:21,667,375-21,674,743 | + | C1H3g18716 | C2H3g06432 | LOC_Os03g41080 | Os03g0607500 | - | Detail |
| CX3g027100 | 3:21,694,149-21,696,643 | - | C1H3g16629 | C2H3g23306 | - | Os03g0653900 | - | Detail |
| CX3g027202 | 3:21,704,222-21,704,458 | - | - | - | - | Os07g0464001 | - | Detail |
| CX3g030355 | 3:21,709,167-21,710,921 | + | C1H3g27711 | C2H3g21545 | - | Os03g0668000 | - | Detail |
| CX3g029197 | 3:21,763,656-21,764,057 | + | - | - | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX3g030299 | 3:21,791,203-21,791,412 | + | C1H3g06149 | - | - | - | - | Detail |
| CX3g029102 | 3:21,839,490-21,841,303 | + | C1H3g12335 | C2H3g26370 | LOC_Os03g41100 | Os03g0607600 | - | Detail |
| CX3g030005 | 3:21,845,082-21,845,789 | - | C1H3g17605 | C2H3g14398 | LOC_Os03g41110 | Os03g0607700 | - | Detail |
| CX3g025971 | 3:21,850,864-21,851,424 | - | C1H3g10600 | C2H3g00849 | - | Os03g0607800 | - | Detail |
| CX3g026864 | 3:21,856,792-21,857,070 | - | - | - | LOC_Os03g41130 | Os03g0608000 | - | Detail |
| CX3g029637 | 3:21,888,835-21,889,838 | + | C1H3g07250 | C2H3g30635 | LOC_Os03g41290 | - | - | Detail |
| CX3g030280 | 3:21,901,360-21,910,847 | - | C1H3g03137 | C2H3g13794 | LOC_Os03g41300 | Os03g0344300 | OsFUG1, OsFUG1.3 | Detail |
| CX3g031263 | 3:21,915,874-21,916,270 | + | C1H3g01434 | C2H3g28367 | LOC_Os03g41300 | Os07g0477000 | - | Detail |
| CX3g029907 | 3:21,920,282-21,922,305 | - | C1H3g20844 | C2H3g17106 | LOC_Os03g41330 | Os03g0609500 | OsLBD38 | Detail |