| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g05903 | 4:4,789,837-4,791,024 | - | C2H4g26263 | CX4g035800 | LOC_Os04g11450 | Os04g0191800 | - | Detail |
| C1H4g05621 | 4:4,822,123-4,829,843 | - | C2H4g25761 | CX4g033552 | LOC_Os04g11640 | Os04g0192775 | - | Detail |
| C1H4g31574 | 4:4,845,148-4,847,652 | + | C2H4g11285 | CX4g034453 | LOC_Os04g11640 | Os04g0193200 | - | Detail |
| C1H4g01782 | 4:4,881,187-4,884,405 | + | C2H4g23687 | CX4g036003 | LOC_Os04g11640 | Os04g0193200 | - | Detail |
| C1H4g23201 | 4:4,888,464-4,889,690 | - | C2H4g26263 | CX4g033050 | LOC_Os04g11660 | Os04g0193300 | - | Detail |
| C1H4g26698 | 4:4,954,897-4,956,627 | - | C2H4g30587 | CX4g035925 | - | - | - | Detail |
| C1H4g03662 | 4:4,973,470-4,976,703 | - | C2H4g17137 | CX4g036339 | LOC_Os05g39490 | Os02g0517900 | - | Detail |
| C1H4g31519 | 4:5,082,569-5,083,072 | + | - | - | - | - | - | Detail |
| C1H4g02299 | 4:5,093,393-5,093,879 | - | C2H4g10370 | CX4g033253 | - | - | - | Detail |
| C1H4g23666 | 4:5,100,751-5,103,996 | - | C2H4g26263 | CX4g033050 | LOC_Os04g11660 | Os04g0193300 | - | Detail |
| C1H4g27268 | 4:5,183,107-5,186,950 | + | C2H4g08740 | CX4g033727 | LOC_Os04g11760 | Os04g0193950 | - | Detail |
| C1H4g00127 | 4:5,209,481-5,215,282 | + | C2H4g24115 | CX4g034119 | - | - | - | Detail |
| C1H4g24522 | 4:5,229,208-5,229,450 | + | - | CX4g033339 | LOC_Os04g11800 | Os04g0194400 | - | Detail |
| C1H4g31455 | 4:5,230,588-5,231,922 | + | C2H4g13106 | CX4g035376 | LOC_Os04g11810 | Os04g0194466 | - | Detail |
| C1H4g11202 | 4:5,233,491-5,240,063 | - | C2H4g01433 | CX4g032821 | LOC_Os04g11820 | Os04g0194500 | - | Detail |
| C1H4g29840 | 4:5,253,729-5,254,277 | - | C2H4g17202 | CX4g033978 | LOC_Os04g11830 | Os04g0194600 | - | Detail |
| C1H4g19431 | 4:5,260,255-5,267,700 | + | C2H4g23993 | CX4g034386 | LOC_Os04g11880 | Os04g0195000 | - | Detail |
| C1H4g23499 | 4:5,272,718-5,273,866 | - | C2H4g26263 | CX4g032660 | LOC_Os04g11890 | Os04g0195100 | - | Detail |
| C1H4g25694 | 4:5,280,260-5,283,553 | + | C2H4g11331 | CX4g031626 | LOC_Os04g11910 | - | - | Detail |
| C1H4g25475 | 4:5,285,880-5,286,483 | + | C2H4g08911 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028784 | 3:21,608,323-21,608,496 | - | - | - | - | Os03g0606466 | - | Detail |
| CX3g031311 | 3:21,611,365-21,611,544 | - | - | - | - | Os02g0188201 | - | Detail |
| CX3g028911 | 3:21,618,849-21,619,244 | - | - | - | - | - | - | Detail |
| CX3g026651 | 3:21,621,431-21,621,703 | + | - | - | - | Os03g0824350 | - | Detail |
| CX3g030042 | 3:21,637,207-21,637,410 | + | - | - | LOC_Os03g01442 | Os03g0104800 | - | Detail |
| CX3g025127 | 3:21,641,274-21,643,745 | - | C1H3g29161 | C2H3g00163 | LOC_Os03g41064 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| CX3g026140 | 3:21,667,375-21,674,743 | + | C1H3g18716 | C2H3g06432 | LOC_Os03g41080 | Os03g0607500 | - | Detail |
| CX3g027100 | 3:21,694,149-21,696,643 | - | C1H3g16629 | C2H3g23306 | - | Os03g0653900 | - | Detail |
| CX3g027202 | 3:21,704,222-21,704,458 | - | - | - | - | Os07g0464001 | - | Detail |
| CX3g030355 | 3:21,709,167-21,710,921 | + | C1H3g27711 | C2H3g21545 | - | Os03g0668000 | - | Detail |
| CX3g029197 | 3:21,763,656-21,764,057 | + | - | - | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX3g030299 | 3:21,791,203-21,791,412 | + | C1H3g06149 | - | - | - | - | Detail |
| CX3g029102 | 3:21,839,490-21,841,303 | + | C1H3g12335 | C2H3g26370 | LOC_Os03g41100 | Os03g0607600 | - | Detail |
| CX3g030005 | 3:21,845,082-21,845,789 | - | C1H3g17605 | C2H3g14398 | LOC_Os03g41110 | Os03g0607700 | - | Detail |
| CX3g025971 | 3:21,850,864-21,851,424 | - | C1H3g10600 | C2H3g00849 | - | Os03g0607800 | - | Detail |
| CX3g026864 | 3:21,856,792-21,857,070 | - | - | - | LOC_Os03g41130 | Os03g0608000 | - | Detail |
| CX3g029637 | 3:21,888,835-21,889,838 | + | C1H3g07250 | C2H3g30635 | LOC_Os03g41290 | - | - | Detail |
| CX3g030280 | 3:21,901,360-21,910,847 | - | C1H3g03137 | C2H3g13794 | LOC_Os03g41300 | Os03g0344300 | OsFUG1, OsFUG1.3 | Detail |
| CX3g031263 | 3:21,915,874-21,916,270 | + | C1H3g01434 | C2H3g28367 | LOC_Os03g41300 | Os07g0477000 | - | Detail |
| CX3g029907 | 3:21,920,282-21,922,305 | - | C1H3g20844 | C2H3g17106 | LOC_Os03g41330 | Os03g0609500 | OsLBD38 | Detail |