| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g03783 | 7:3,780,217-3,783,465 | - | C2H7g16319 | CX7g046571 | LOC_Os07g08430 | Os07g0182100 | - | Detail |
| C1H7g22816 | 7:3,789,335-3,792,475 | + | C2H7g13219 | CX7g046025 | LOC_Os07g08440 | Os07g0182200 | - | Detail |
| C1H7g08147 | 7:3,807,676-3,808,974 | - | C2H7g21054 | CX7g048026 | LOC_Os07g08460 | Os07g0182400 | - | Detail |
| C1H7g08163 | 7:3,832,487-3,833,275 | - | C2H7g27628 | CX7g049402 | - | Os07g0182601 | - | Detail |
| C1H7g17559 | 7:3,840,379-3,847,180 | + | C2H7g01878 | CX7g047392 | LOC_Os07g08500 | Os07g0182900 | MET1B, OsMET1b | Detail |
| C1H7g01208 | 7:3,883,980-3,887,626 | - | C2H7g05997 | CX7g049817 | LOC_Os07g08520 | Os07g0183100 | - | Detail |
| C1H7g01935 | 7:3,888,270-3,889,742 | + | C2H7g13555 | CX7g047842 | LOC_Os07g08530 | Os07g0183200 | - | Detail |
| C1H7g03119 | 7:3,909,043-3,910,595 | - | C2H7g11185 | CX7g049244 | LOC_Os07g08660 | Os03g0798600 | - | Detail |
| C1H7g16015 | 7:3,918,959-3,920,511 | + | C2H7g06349 | CX7g047415 | LOC_Os07g08710 | Os07g0184800 | OsATH1 | Detail |
| C1H7g09330 | 7:3,921,171-3,929,205 | + | C2H7g15936 | CX7g046514 | LOC_Os07g08729 | Os07g0184900 | - | Detail |
| C1H7g00026 | 7:3,931,908-3,934,880 | - | C2H7g05786 | CX7g048929 | LOC_Os07g08750 | Os07g0185000 | - | Detail |
| C1H7g02270 | 7:3,936,833-3,941,172 | - | C2H7g20869 | CX7g050270 | LOC_Os07g08760 | Os07g0185200 | - | Detail |
| C1H7g21233 | 7:3,960,432-3,966,423 | + | C2H7g09570 | CX7g050362 | LOC_Os07g08790 | Os07g0185432 | - | Detail |
| C1H7g04399 | 7:3,974,316-3,981,839 | + | C2H7g02745 | CX7g049699 | LOC_Os07g08810 | Os07g0185700 | - | Detail |
| C1H7g17793 | 7:3,985,947-3,989,076 | + | C2H7g29336 | CX7g048108 | LOC_Os07g08820 | Os07g0185800 | - | Detail |
| C1H7g13541 | 7:3,997,534-3,997,770 | - | C2H7g13139 | CX3g028966 | - | Os07g0185900 | - | Detail |
| C1H7g15110 | 7:4,004,800-4,006,586 | - | C2H7g30045 | CX7g047579 | LOC_Os07g08840 | Os07g0186000 | TRXH, trxh, Trx-H, OsTRXh1, OsTrxh1, Os1, OsTrx23, RPP13-1 | Detail |
| C1H7g31770 | 7:4,031,391-4,036,599 | + | C2H7g00916 | CX7g047241 | LOC_Os07g08880 | Os07g0186400 | OsSHL1 | Detail |
| C1H7g06257 | 7:4,038,943-4,041,663 | + | C2H7g24863 | CX7g047241 | LOC_Os07g08890 | Os07g0186500 | - | Detail |
| C1H7g14544 | 7:4,044,365-4,050,529 | + | C2H7g24828 | CX7g047294 | LOC_Os07g08950 | Os07g0187200 | OsD-LDH2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028784 | 3:21,608,323-21,608,496 | - | - | - | - | Os03g0606466 | - | Detail |
| CX3g031311 | 3:21,611,365-21,611,544 | - | - | - | - | Os02g0188201 | - | Detail |
| CX3g028911 | 3:21,618,849-21,619,244 | - | - | - | - | - | - | Detail |
| CX3g026651 | 3:21,621,431-21,621,703 | + | - | - | - | Os03g0824350 | - | Detail |
| CX3g030042 | 3:21,637,207-21,637,410 | + | - | - | LOC_Os03g01442 | Os03g0104800 | - | Detail |
| CX3g025127 | 3:21,641,274-21,643,745 | - | C1H3g29161 | C2H3g00163 | LOC_Os03g41064 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| CX3g026140 | 3:21,667,375-21,674,743 | + | C1H3g18716 | C2H3g06432 | LOC_Os03g41080 | Os03g0607500 | - | Detail |
| CX3g027100 | 3:21,694,149-21,696,643 | - | C1H3g16629 | C2H3g23306 | - | Os03g0653900 | - | Detail |
| CX3g027202 | 3:21,704,222-21,704,458 | - | - | - | - | Os07g0464001 | - | Detail |
| CX3g030355 | 3:21,709,167-21,710,921 | + | C1H3g27711 | C2H3g21545 | - | Os03g0668000 | - | Detail |
| CX3g029197 | 3:21,763,656-21,764,057 | + | - | - | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX3g030299 | 3:21,791,203-21,791,412 | + | C1H3g06149 | - | - | - | - | Detail |
| CX3g029102 | 3:21,839,490-21,841,303 | + | C1H3g12335 | C2H3g26370 | LOC_Os03g41100 | Os03g0607600 | - | Detail |
| CX3g030005 | 3:21,845,082-21,845,789 | - | C1H3g17605 | C2H3g14398 | LOC_Os03g41110 | Os03g0607700 | - | Detail |
| CX3g025971 | 3:21,850,864-21,851,424 | - | C1H3g10600 | C2H3g00849 | - | Os03g0607800 | - | Detail |
| CX3g026864 | 3:21,856,792-21,857,070 | - | - | - | LOC_Os03g41130 | Os03g0608000 | - | Detail |
| CX3g029637 | 3:21,888,835-21,889,838 | + | C1H3g07250 | C2H3g30635 | LOC_Os03g41290 | - | - | Detail |
| CX3g030280 | 3:21,901,360-21,910,847 | - | C1H3g03137 | C2H3g13794 | LOC_Os03g41300 | Os03g0344300 | OsFUG1, OsFUG1.3 | Detail |
| CX3g031263 | 3:21,915,874-21,916,270 | + | C1H3g01434 | C2H3g28367 | LOC_Os03g41300 | Os07g0477000 | - | Detail |
| CX3g029907 | 3:21,920,282-21,922,305 | - | C1H3g20844 | C2H3g17106 | LOC_Os03g41330 | Os03g0609500 | OsLBD38 | Detail |