| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g02861 | 6:9,321,596-9,324,952 | - | C2H6g26580 | CX6g043920 | LOC_Os06g19640 | Os06g0300600 | - | Detail |
| C1H6g14940 | 6:9,332,062-9,332,996 | + | - | - | - | - | - | Detail |
| C1H6g26999 | 6:9,333,103-9,338,082 | + | C2H6g03142 | CX6g045766 | LOC_Os06g19650 | Os06g0300700 | - | Detail |
| C1H6g02079 | 6:9,343,432-9,352,103 | + | C2H6g00260 | CX6g043735 | LOC_Os06g19660 | Os06g0300800 | - | Detail |
| C1H6g04702 | 6:9,372,351-9,377,827 | - | C2H6g11264 | CX6g043851 | LOC_Os06g19680 | Os06g0301000 | MAL, OsMAL | Detail |
| C1H6g17786 | 6:9,380,262-9,385,485 | - | C2H6g15269 | CX6g044892 | LOC_Os06g19690 | Os06g0301100 | - | Detail |
| C1H6g16427 | 6:9,400,161-9,417,405 | + | C2H6g20000 | CX6g043357 | LOC_Os06g19730 | Os06g0301300 | - | Detail |
| C1H6g18993 | 6:9,420,919-9,421,499 | - | C2H1g25920 | CX1g005321 | LOC_Os09g32790 | - | - | Detail |
| C1H6g20576 | 6:9,423,301-9,426,436 | - | C2H6g13299 | CX6g044935 | LOC_Os06g19740 | Os06g0301400 | - | Detail |
| C1H6g07716 | 6:9,427,805-9,428,371 | + | - | CX6g044975 | LOC_Os06g19750 | Os06g0301500 | - | Detail |
| C1H6g09002 | 6:9,433,843-9,435,687 | - | C2H6g05182 | - | LOC_Os06g19740 | Os06g0301400 | - | Detail |
| C1H6g06926 | 6:9,460,816-9,465,080 | + | C2H6g25869 | CX6g042957 | LOC_Os06g19800 | Os06g0302000 | - | Detail |
| C1H6g26203 | 6:9,470,551-9,471,390 | + | C2H6g25869 | CX6g042957 | LOC_Os06g19800 | Os06g0302650 | - | Detail |
| C1H6g21217 | 6:9,501,937-9,503,319 | + | - | - | - | Os06g0303400 | - | Detail |
| C1H6g23546 | 6:9,509,293-9,521,525 | + | C2H6g30287 | CX6g043293 | LOC_Os06g19960 | Os06g0303400 | - | Detail |
| C1H6g18924 | 6:9,532,052-9,533,185 | + | C2H6g19345 | CX6g043277 | LOC_Os06g19980 | Os06g0303700 | - | Detail |
| C1H6g02314 | 6:9,536,077-9,539,807 | + | - | CX6g043277 | LOC_Os06g19980 | - | - | Detail |
| C1H6g02136 | 6:9,540,852-9,543,236 | + | C2H6g10205 | CX6g041533 | LOC_Os06g19990 | Os06g0303800 | - | Detail |
| C1H6g14279 | 6:9,556,404-9,557,000 | - | C2H6g00381 | CX6g045366 | - | Os06g0304300 | - | Detail |
| C1H6g02911 | 6:9,561,178-9,562,676 | + | C2H6g02144 | CX6g041211 | LOC_Os06g20030 | Os06g0304500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028784 | 3:21,608,323-21,608,496 | - | - | - | - | Os03g0606466 | - | Detail |
| CX3g031311 | 3:21,611,365-21,611,544 | - | - | - | - | Os02g0188201 | - | Detail |
| CX3g028911 | 3:21,618,849-21,619,244 | - | - | - | - | - | - | Detail |
| CX3g026651 | 3:21,621,431-21,621,703 | + | - | - | - | Os03g0824350 | - | Detail |
| CX3g030042 | 3:21,637,207-21,637,410 | + | - | - | LOC_Os03g01442 | Os03g0104800 | - | Detail |
| CX3g025127 | 3:21,641,274-21,643,745 | - | C1H3g29161 | C2H3g00163 | LOC_Os03g41064 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| CX3g026140 | 3:21,667,375-21,674,743 | + | C1H3g18716 | C2H3g06432 | LOC_Os03g41080 | Os03g0607500 | - | Detail |
| CX3g027100 | 3:21,694,149-21,696,643 | - | C1H3g16629 | C2H3g23306 | - | Os03g0653900 | - | Detail |
| CX3g027202 | 3:21,704,222-21,704,458 | - | - | - | - | Os07g0464001 | - | Detail |
| CX3g030355 | 3:21,709,167-21,710,921 | + | C1H3g27711 | C2H3g21545 | - | Os03g0668000 | - | Detail |
| CX3g029197 | 3:21,763,656-21,764,057 | + | - | - | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX3g030299 | 3:21,791,203-21,791,412 | + | C1H3g06149 | - | - | - | - | Detail |
| CX3g029102 | 3:21,839,490-21,841,303 | + | C1H3g12335 | C2H3g26370 | LOC_Os03g41100 | Os03g0607600 | - | Detail |
| CX3g030005 | 3:21,845,082-21,845,789 | - | C1H3g17605 | C2H3g14398 | LOC_Os03g41110 | Os03g0607700 | - | Detail |
| CX3g025971 | 3:21,850,864-21,851,424 | - | C1H3g10600 | C2H3g00849 | - | Os03g0607800 | - | Detail |
| CX3g026864 | 3:21,856,792-21,857,070 | - | - | - | LOC_Os03g41130 | Os03g0608000 | - | Detail |
| CX3g029637 | 3:21,888,835-21,889,838 | + | C1H3g07250 | C2H3g30635 | LOC_Os03g41290 | - | - | Detail |
| CX3g030280 | 3:21,901,360-21,910,847 | - | C1H3g03137 | C2H3g13794 | LOC_Os03g41300 | Os03g0344300 | OsFUG1, OsFUG1.3 | Detail |
| CX3g031263 | 3:21,915,874-21,916,270 | + | C1H3g01434 | C2H3g28367 | LOC_Os03g41300 | Os07g0477000 | - | Detail |
| CX3g029907 | 3:21,920,282-21,922,305 | - | C1H3g20844 | C2H3g17106 | LOC_Os03g41330 | Os03g0609500 | OsLBD38 | Detail |