| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g07507 | 2:25,286,767-25,292,919 | - | C1H2g08635 | CX2g019043 | LOC_Os02g44975 | Os02g0670700 | - | Detail |
| C2H2g00797 | 2:25,297,624-25,298,892 | + | C1H2g21963 | CX2g024431 | LOC_Os02g44980 | Os02g0670900 | - | Detail |
| C2H2g26127 | 2:25,301,759-25,302,892 | + | - | CX2g022519 | LOC_Os02g44990 | Os02g0671100 | MAIF1 | Detail |
| C2H2g13844 | 2:25,306,266-25,307,342 | + | - | CX2g022271 | LOC_Os02g45000 | Os02g0671200 | - | Detail |
| C2H2g28093 | 2:25,310,721-25,313,614 | - | C1H2g23021 | CX2g019738 | LOC_Os02g45010 | Os02g0671300 | - | Detail |
| C2H2g25964 | 2:25,340,224-25,349,419 | + | C1H2g21457 | CX2g022320 | LOC_Os02g45054 | Os02g0672100 | OsIDD4, SID1 | Detail |
| C2H2g22467 | 2:25,354,622-25,366,880 | - | C1H2g11352 | CX2g021691 | LOC_Os02g45070 | Os02g0672200 | - | Detail |
| C2H2g05576 | 2:25,372,547-25,375,291 | + | C1H2g21284 | CX2g018829 | LOC_Os02g45080 | Os02g0168200 | - | Detail |
| C2H2g29807 | 2:25,377,533-25,382,598 | - | C1H2g30841 | CX2g020078 | LOC_Os02g45090 | Os02g0672400 | - | Detail |
| C2H2g25763 | 2:25,384,523-25,385,122 | - | - | CX2g019957 | LOC_Os02g45100 | Os02g0672500 | - | Detail |
| C2H2g23823 | 2:25,385,941-25,389,863 | + | C1H2g09721 | CX2g022558 | LOC_Os02g45110 | Os02g0672600 | OsMTA2 | Detail |
| C2H2g27864 | 2:25,392,498-25,394,051 | + | C1H2g17265 | CX2g020462 | - | Os02g0672700 | - | Detail |
| C2H2g19722 | 2:25,394,464-25,399,070 | - | C1H2g06794 | CX2g020387 | LOC_Os02g45130 | Os02g0672800 | - | Detail |
| C2H2g29141 | 2:25,407,193-25,408,387 | + | C1H2g28086 | CX2g019881 | LOC_Os02g45160 | Os02g0673100 | - | Detail |
| C2H2g27637 | 2:25,411,758-25,414,100 | - | C1H2g27166 | CX2g020832 | LOC_Os02g45160 | Os02g0673100 | - | Detail |
| C2H2g10348 | 2:25,438,290-25,443,583 | + | C1H2g11887 | CX2g024161 | LOC_Os02g45170 | Os02g0673500 | OsLHW | Detail |
| C2H2g28406 | 2:25,446,368-25,450,785 | + | C1H2g28162 | CX2g021906 | LOC_Os02g45180 | Os02g0673600 | - | Detail |
| C2H2g24261 | 2:25,459,688-25,461,879 | - | C1H2g16674 | CX2g022483 | LOC_Os02g45200 | Os02g0673700 | - | Detail |
| C2H2g25120 | 2:25,488,809-25,489,135 | - | - | CX2g024043 | LOC_Os02g45225 | Os02g0674233 | - | Detail |
| C2H2g23214 | 2:25,496,526-25,500,863 | - | C1H2g05896 | CX2g023908 | LOC_Os02g45240 | Os02g0674700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026097 | 3:21,380,277-21,384,963 | + | C1H3g17649 | C2H3g17661 | LOC_Os03g40550 | Os03g0602600 | HSA1, OsFLN2, HSA1/OsFLN2 | Detail |
| CX3g026160 | 3:21,389,005-21,394,234 | - | C1H3g14588 | C2H3g06081 | LOC_Os03g40600 | Os03g0603100 | - | Detail |
| CX3g029655 | 3:21,408,767-21,409,003 | - | - | - | - | Os07g0464001 | - | Detail |
| CX3g026123 | 3:21,424,861-21,426,033 | - | - | - | LOC_Os03g40650 | Os03g0603300 | - | Detail |
| CX3g027440 | 3:21,437,681-21,438,094 | - | - | - | - | - | - | Detail |
| CX3g026611 | 3:21,455,200-21,456,726 | + | - | - | - | Os03g0603500 | - | Detail |
| CX3g029684 | 3:21,459,463-21,462,273 | + | C1H3g26758 | C2H3g09028 | LOC_Os03g40670 | Os03g0603600 | - | Detail |
| CX3g028487 | 3:21,463,866-21,464,135 | - | C1H11g16302 | C2H11g04601 | - | - | - | Detail |
| CX3g027402 | 3:21,467,278-21,475,547 | + | C1H3g07265 | C2H3g27980 | LOC_Os03g40690 | Os03g0569800 | - | Detail |
| CX3g028102 | 3:21,477,638-21,478,888 | + | - | - | LOC_Os03g40700 | Os03g0603800 | - | Detail |
| CX3g030467 | 3:21,508,206-21,509,684 | + | - | - | - | Os03g0757950 | - | Detail |
| CX3g030318 | 3:21,520,344-21,520,832 | + | - | - | LOC_Os03g40725 | Os03g0604500 | - | Detail |
| CX3g025313 | 3:21,531,971-21,532,696 | + | C1H3g27392 | C2H3g23447 | LOC_Os03g40770 | Os03g0604566 | - | Detail |
| CX3g029068 | 3:21,534,785-21,539,438 | - | C1H3g29572 | C2H3g01476 | LOC_Os03g40780 | Os03g0604600 | - | Detail |
| CX3g029593 | 3:21,562,757-21,565,048 | + | C1H3g00814 | C2H3g07310 | LOC_Os03g40830 | Os03g0605300 | - | Detail |
| CX3g028034 | 3:21,566,308-21,566,475 | - | - | - | - | - | - | Detail |
| CX3g030298 | 3:21,575,141-21,579,220 | - | C1H3g11700 | C2H3g22818 | LOC_Os03g40840 | Os03g0165900 | - | Detail |
| CX3g028391 | 3:21,581,331-21,582,149 | + | C1H3g31311 | C2H3g24067 | - | - | - | Detail |
| CX3g030284 | 3:21,584,907-21,587,745 | + | - | - | LOC_Os03g40900 | Os03g0606200 | RMtATP6 | Detail |
| CX3g025804 | 3:21,591,918-21,593,920 | - | C1H3g15527 | C2H3g29089 | LOC_Os03g40930 | Os03g0606100 | - | Detail |