| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g26851 | 1:3,707,393-3,708,893 | - | C1H1g03096 | CX1g001675 | LOC_Os01g08520 | Os01g0180400 | - | Detail |
| C2H1g01950 | 1:3,728,074-3,729,522 | - | C1H1g30826 | - | - | - | - | Detail |
| C2H1g00248 | 1:3,730,732-3,740,332 | - | C1H1g26098 | CX1g004464 | LOC_Os01g08540 | Os01g0180600 | OsMSH7 | Detail |
| C2H1g21704 | 1:3,741,695-3,745,728 | - | C1H1g08568 | CX1g000897 | LOC_Os01g08550 | Os01g0180700 | - | Detail |
| C2H1g05564 | 1:3,749,453-3,755,095 | + | C1H1g20143 | CX1g001317 | LOC_Os01g08560 | Os01g0180800 | - | Detail |
| C2H1g23466 | 1:3,761,240-3,764,187 | + | C1H1g04959 | CX1g001824 | LOC_Os01g08570 | Os01g0180900 | PEG1 | Detail |
| C2H1g27267 | 1:3,765,756-3,767,210 | + | C1H1g21972 | CX1g001824 | LOC_Os01g08570 | Os01g0180900 | PEG1 | Detail |
| C2H1g05619 | 1:3,770,104-3,773,496 | - | C1H1g29421 | CX1g003309 | LOC_Os01g08580 | Os01g0181000 | - | Detail |
| C2H1g09388 | 1:3,775,340-3,777,724 | + | C1H1g05943 | CX1g005635 | LOC_Os01g08650 | Os01g0182100 | - | Detail |
| C2H1g25325 | 1:3,785,475-3,787,613 | - | C1H1g28299 | CX1g002190 | LOC_Os01g08660 | Os01g0182200 | OsSIP1 | Detail |
| C2H1g14172 | 1:3,790,211-3,790,720 | - | - | CX1g003026 | LOC_Os01g08670 | Os01g0182300 | - | Detail |
| C2H1g08590 | 1:3,795,092-3,797,259 | - | C1H1g29977 | CX1g002385 | LOC_Os01g08680 | Os01g0182400 | - | Detail |
| C2H1g03691 | 1:3,798,731-3,800,299 | + | C1H1g01569 | CX1g002667 | LOC_Os01g08690 | Os01g0182500 | - | Detail |
| C2H1g22882 | 1:3,801,353-3,810,578 | - | C1H1g31395 | CX1g006236 | LOC_Os01g08700 | Os01g0182600 | - | Detail |
| C2H1g00342 | 1:3,819,410-3,820,759 | - | C1H1g26932 | CX1g007148 | LOC_Os01g08710 | Os01g0182700 | OsWRKY102 | Detail |
| C2H1g21272 | 1:3,827,411-3,828,201 | - | C1H1g26932 | CX1g007148 | LOC_Os01g08710 | Os01g0182700 | OsWRKY102 | Detail |
| C2H1g11324 | 1:3,834,124-3,852,241 | + | C1H1g19772 | CX1g003782 | LOC_Os01g08750 | Os01g0182900 | - | Detail |
| C2H1g13544 | 1:3,853,989-3,856,159 | + | C1H1g02231 | CX1g000301 | LOC_Os01g08760 | Os01g0183000 | - | Detail |
| C2H1g29251 | 1:3,856,189-3,857,128 | + | C1H1g18568 | - | - | - | - | Detail |
| C2H1g26288 | 1:3,857,292-3,861,017 | + | C1H1g31443 | CX1g000793 | LOC_Os01g08770 | Os01g0183100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026097 | 3:21,380,277-21,384,963 | + | C1H3g17649 | C2H3g17661 | LOC_Os03g40550 | Os03g0602600 | HSA1, OsFLN2, HSA1/OsFLN2 | Detail |
| CX3g026160 | 3:21,389,005-21,394,234 | - | C1H3g14588 | C2H3g06081 | LOC_Os03g40600 | Os03g0603100 | - | Detail |
| CX3g029655 | 3:21,408,767-21,409,003 | - | - | - | - | Os07g0464001 | - | Detail |
| CX3g026123 | 3:21,424,861-21,426,033 | - | - | - | LOC_Os03g40650 | Os03g0603300 | - | Detail |
| CX3g027440 | 3:21,437,681-21,438,094 | - | - | - | - | - | - | Detail |
| CX3g026611 | 3:21,455,200-21,456,726 | + | - | - | - | Os03g0603500 | - | Detail |
| CX3g029684 | 3:21,459,463-21,462,273 | + | C1H3g26758 | C2H3g09028 | LOC_Os03g40670 | Os03g0603600 | - | Detail |
| CX3g028487 | 3:21,463,866-21,464,135 | - | C1H11g16302 | C2H11g04601 | - | - | - | Detail |
| CX3g027402 | 3:21,467,278-21,475,547 | + | C1H3g07265 | C2H3g27980 | LOC_Os03g40690 | Os03g0569800 | - | Detail |
| CX3g028102 | 3:21,477,638-21,478,888 | + | - | - | LOC_Os03g40700 | Os03g0603800 | - | Detail |
| CX3g030467 | 3:21,508,206-21,509,684 | + | - | - | - | Os03g0757950 | - | Detail |
| CX3g030318 | 3:21,520,344-21,520,832 | + | - | - | LOC_Os03g40725 | Os03g0604500 | - | Detail |
| CX3g025313 | 3:21,531,971-21,532,696 | + | C1H3g27392 | C2H3g23447 | LOC_Os03g40770 | Os03g0604566 | - | Detail |
| CX3g029068 | 3:21,534,785-21,539,438 | - | C1H3g29572 | C2H3g01476 | LOC_Os03g40780 | Os03g0604600 | - | Detail |
| CX3g029593 | 3:21,562,757-21,565,048 | + | C1H3g00814 | C2H3g07310 | LOC_Os03g40830 | Os03g0605300 | - | Detail |
| CX3g028034 | 3:21,566,308-21,566,475 | - | - | - | - | - | - | Detail |
| CX3g030298 | 3:21,575,141-21,579,220 | - | C1H3g11700 | C2H3g22818 | LOC_Os03g40840 | Os03g0165900 | - | Detail |
| CX3g028391 | 3:21,581,331-21,582,149 | + | C1H3g31311 | C2H3g24067 | - | - | - | Detail |
| CX3g030284 | 3:21,584,907-21,587,745 | + | - | - | LOC_Os03g40900 | Os03g0606200 | RMtATP6 | Detail |
| CX3g025804 | 3:21,591,918-21,593,920 | - | C1H3g15527 | C2H3g29089 | LOC_Os03g40930 | Os03g0606100 | - | Detail |