| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g24692 | 2:23,261,898-23,264,753 | - | C2H2g28960 | CX2g019549 | LOC_Os02g41480 | Os02g0623600 | - | Detail |
| C1H2g28052 | 2:23,272,060-23,273,777 | - | C2H2g23490 | - | LOC_Os02g41490 | - | - | Detail |
| C1H2g10845 | 2:23,274,791-23,276,783 | - | C2H2g09222 | CX2g019549 | LOC_Os02g41500 | Os02g0623932 | - | Detail |
| C1H2g31771 | 2:23,276,819-23,277,253 | - | C2H2g05626 | CX2g019332 | LOC_Os02g41500 | Os02g0624100 | - | Detail |
| C1H2g14607 | 2:23,283,546-23,284,442 | - | C2H2g21291 | CX2g020985 | LOC_Os02g41510 | Os02g0624300 | OsMYB30, OsMYB5P | Detail |
| C1H2g25292 | 2:23,296,362-23,301,852 | + | C2H2g15398 | CX2g019605 | LOC_Os02g41520 | Os02g0624400 | - | Detail |
| C1H2g21346 | 2:23,305,811-23,312,212 | + | C2H2g09545 | CX2g021076 | LOC_Os02g41550 | Os02g0625000 | - | Detail |
| C1H2g30957 | 2:23,315,370-23,315,628 | - | - | - | - | - | - | Detail |
| C1H2g23857 | 2:23,315,683-23,315,897 | - | - | - | - | - | - | Detail |
| C1H2g17897 | 2:23,331,977-23,333,420 | + | C2H2g18059 | CX2g019216 | LOC_Os02g41580 | Os02g0625300 | - | Detail |
| C1H2g11053 | 2:23,337,994-23,343,678 | - | C2H2g11933 | CX2g019321 | LOC_Os02g41590 | Os02g0625500 | - | Detail |
| C1H2g01239 | 2:23,350,642-23,357,309 | + | C2H2g22654 | CX2g021369 | LOC_Os02g41610 | Os02g0625900 | - | Detail |
| C1H2g24503 | 2:23,367,290-23,371,213 | - | C2H2g12458 | CX2g019721 | LOC_Os02g41630 | Os02g0626100 | - | Detail |
| C1H2g10363 | 2:23,379,727-23,384,648 | - | C2H2g01685 | CX2g021604 | LOC_Os02g41650 | Os02g0626400 | - | Detail |
| C1H2g23853 | 2:23,388,069-23,390,210 | - | C2H2g30462 | CX2g023963 | LOC_Os02g41670 | Os02g0626600 | PAL3 | Detail |
| C1H2g05283 | 2:23,393,200-23,395,822 | - | C2H2g15020 | CX2g024160 | LOC_Os02g41680 | Os02g0627100 | OsPAL4 | Detail |
| C1H2g07931 | 2:23,415,975-23,418,774 | + | C2H2g27127 | CX2g021913 | LOC_Os02g41710 | Os02g0627700 | OsCNGC7 | Detail |
| C1H2g13176 | 2:23,419,344-23,420,940 | - | C2H2g10818 | CX2g021975 | LOC_Os02g41760 | Os02g0627900 | - | Detail |
| C1H2g03519 | 2:23,426,139-23,429,154 | + | C2H2g11015 | CX2g024868 | LOC_Os02g41770 | Os02g0628000 | - | Detail |
| C1H2g23138 | 2:23,435,330-23,439,285 | + | C2H2g16036 | CX2g021958 | LOC_Os02g41780 | Os02g0628200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026097 | 3:21,380,277-21,384,963 | + | C1H3g17649 | C2H3g17661 | LOC_Os03g40550 | Os03g0602600 | HSA1, OsFLN2, HSA1/OsFLN2 | Detail |
| CX3g026160 | 3:21,389,005-21,394,234 | - | C1H3g14588 | C2H3g06081 | LOC_Os03g40600 | Os03g0603100 | - | Detail |
| CX3g029655 | 3:21,408,767-21,409,003 | - | - | - | - | Os07g0464001 | - | Detail |
| CX3g026123 | 3:21,424,861-21,426,033 | - | - | - | LOC_Os03g40650 | Os03g0603300 | - | Detail |
| CX3g027440 | 3:21,437,681-21,438,094 | - | - | - | - | - | - | Detail |
| CX3g026611 | 3:21,455,200-21,456,726 | + | - | - | - | Os03g0603500 | - | Detail |
| CX3g029684 | 3:21,459,463-21,462,273 | + | C1H3g26758 | C2H3g09028 | LOC_Os03g40670 | Os03g0603600 | - | Detail |
| CX3g028487 | 3:21,463,866-21,464,135 | - | C1H11g16302 | C2H11g04601 | - | - | - | Detail |
| CX3g027402 | 3:21,467,278-21,475,547 | + | C1H3g07265 | C2H3g27980 | LOC_Os03g40690 | Os03g0569800 | - | Detail |
| CX3g028102 | 3:21,477,638-21,478,888 | + | - | - | LOC_Os03g40700 | Os03g0603800 | - | Detail |
| CX3g030467 | 3:21,508,206-21,509,684 | + | - | - | - | Os03g0757950 | - | Detail |
| CX3g030318 | 3:21,520,344-21,520,832 | + | - | - | LOC_Os03g40725 | Os03g0604500 | - | Detail |
| CX3g025313 | 3:21,531,971-21,532,696 | + | C1H3g27392 | C2H3g23447 | LOC_Os03g40770 | Os03g0604566 | - | Detail |
| CX3g029068 | 3:21,534,785-21,539,438 | - | C1H3g29572 | C2H3g01476 | LOC_Os03g40780 | Os03g0604600 | - | Detail |
| CX3g029593 | 3:21,562,757-21,565,048 | + | C1H3g00814 | C2H3g07310 | LOC_Os03g40830 | Os03g0605300 | - | Detail |
| CX3g028034 | 3:21,566,308-21,566,475 | - | - | - | - | - | - | Detail |
| CX3g030298 | 3:21,575,141-21,579,220 | - | C1H3g11700 | C2H3g22818 | LOC_Os03g40840 | Os03g0165900 | - | Detail |
| CX3g028391 | 3:21,581,331-21,582,149 | + | C1H3g31311 | C2H3g24067 | - | - | - | Detail |
| CX3g030284 | 3:21,584,907-21,587,745 | + | - | - | LOC_Os03g40900 | Os03g0606200 | RMtATP6 | Detail |
| CX3g025804 | 3:21,591,918-21,593,920 | - | C1H3g15527 | C2H3g29089 | LOC_Os03g40930 | Os03g0606100 | - | Detail |