| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g12332 | 2:8,150,024-8,154,379 | - | C2H2g27477 | CX2g020535 | LOC_Os02g15310 | Os02g0252100 | OsSCL30a | Detail |
| C1H2g26833 | 2:8,173,712-8,175,121 | + | C2H2g02364 | CX2g021498 | LOC_Os02g15340 | Os02g0252200 | - | Detail |
| C1H2g16698 | 2:8,180,179-8,181,324 | - | C2H2g11974 | CX2g020199 | LOC_Os02g15350 | Os02g0252400 | RPBF, OsDof3, OsDOF3, OsEnS-34, OsDof10, Dof10, OsDof-10, OsDOF1, DOF1, DOF3 | Detail |
| C1H2g12137 | 2:8,189,309-8,191,556 | - | C2H2g21408 | CX2g021836 | LOC_Os02g15360 | Os02g0252600 | - | Detail |
| C1H2g17825 | 2:8,200,718-8,202,568 | - | C2H2g22380 | CX2g024046 | LOC_Os02g15520 | Os02g0254550 | - | Detail |
| C1H2g01415 | 2:8,214,626-8,215,051 | - | C2H2g23473 | CX2g020061 | LOC_Os02g15540 | Os02g0254600 | - | Detail |
| C1H2g02874 | 2:8,232,192-8,236,602 | - | C2H2g25388 | CX2g023976 | LOC_Os02g15550 | Os02g0254700 | - | Detail |
| C1H2g18691 | 2:8,249,680-8,258,610 | - | C2H2g17278 | CX2g021174 | LOC_Os02g15580 | Os02g0255000 | OsCNGC1 | Detail |
| C1H2g13076 | 2:8,262,844-8,269,125 | + | C2H2g07822 | CX2g021622 | LOC_Os02g15594 | Os02g0255100 | - | Detail |
| C1H2g14262 | 2:8,270,047-8,272,175 | - | C2H2g05025 | CX2g019828 | LOC_Os02g15610 | Os02g0255200 | - | Detail |
| C1H2g16909 | 2:8,282,692-8,290,507 | + | C2H2g18123 | CX2g024140 | LOC_Os02g15620 | Os02g0255300 | - | Detail |
| C1H2g10890 | 2:8,315,938-8,319,526 | + | C2H2g13840 | CX2g024336 | LOC_Os02g15640 | Os02g0255500 | OsPYL10, OsPYL/RCAR3, OsPYL3, OsRCAR1 | Detail |
| C1H2g12749 | 2:8,329,064-8,339,845 | - | C2H2g21607 | CX2g023660 | LOC_Os02g15660 | Os02g0255700 | - | Detail |
| C1H2g23974 | 2:8,351,549-8,352,123 | + | C2H2g01477 | CX2g022146 | LOC_Os02g15690 | Os02g0256100 | - | Detail |
| C1H2g06443 | 2:8,352,962-8,354,167 | + | C2H2g11923 | CX2g022146 | LOC_Os02g15690 | Os02g0256100 | - | Detail |
| C1H2g03270 | 2:8,357,807-8,358,820 | - | C2H2g12367 | CX2g020997 | LOC_Os02g15700 | Os02g0256200 | OsHARP | Detail |
| C1H2g23606 | 2:8,365,897-8,366,691 | - | C2H2g10056 | CX2g019952 | LOC_Os02g15710 | Os02g0256800 | - | Detail |
| C1H2g20379 | 2:8,396,340-8,397,023 | - | C2H2g17559 | CX2g023968 | LOC_Os02g15730 | Os02g0257100 | - | Detail |
| C1H2g24379 | 2:8,398,834-8,401,265 | - | C2H2g28950 | CX2g021668 | LOC_Os02g15740 | Os02g0257200 | - | Detail |
| C1H2g05055 | 2:8,402,368-8,405,939 | + | C2H2g25189 | CX2g019120 | LOC_Os02g15750 | Os02g0257300 | OsTROL1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026097 | 3:21,380,277-21,384,963 | + | C1H3g17649 | C2H3g17661 | LOC_Os03g40550 | Os03g0602600 | HSA1, OsFLN2, HSA1/OsFLN2 | Detail |
| CX3g026160 | 3:21,389,005-21,394,234 | - | C1H3g14588 | C2H3g06081 | LOC_Os03g40600 | Os03g0603100 | - | Detail |
| CX3g029655 | 3:21,408,767-21,409,003 | - | - | - | - | Os07g0464001 | - | Detail |
| CX3g026123 | 3:21,424,861-21,426,033 | - | - | - | LOC_Os03g40650 | Os03g0603300 | - | Detail |
| CX3g027440 | 3:21,437,681-21,438,094 | - | - | - | - | - | - | Detail |
| CX3g026611 | 3:21,455,200-21,456,726 | + | - | - | - | Os03g0603500 | - | Detail |
| CX3g029684 | 3:21,459,463-21,462,273 | + | C1H3g26758 | C2H3g09028 | LOC_Os03g40670 | Os03g0603600 | - | Detail |
| CX3g028487 | 3:21,463,866-21,464,135 | - | C1H11g16302 | C2H11g04601 | - | - | - | Detail |
| CX3g027402 | 3:21,467,278-21,475,547 | + | C1H3g07265 | C2H3g27980 | LOC_Os03g40690 | Os03g0569800 | - | Detail |
| CX3g028102 | 3:21,477,638-21,478,888 | + | - | - | LOC_Os03g40700 | Os03g0603800 | - | Detail |
| CX3g030467 | 3:21,508,206-21,509,684 | + | - | - | - | Os03g0757950 | - | Detail |
| CX3g030318 | 3:21,520,344-21,520,832 | + | - | - | LOC_Os03g40725 | Os03g0604500 | - | Detail |
| CX3g025313 | 3:21,531,971-21,532,696 | + | C1H3g27392 | C2H3g23447 | LOC_Os03g40770 | Os03g0604566 | - | Detail |
| CX3g029068 | 3:21,534,785-21,539,438 | - | C1H3g29572 | C2H3g01476 | LOC_Os03g40780 | Os03g0604600 | - | Detail |
| CX3g029593 | 3:21,562,757-21,565,048 | + | C1H3g00814 | C2H3g07310 | LOC_Os03g40830 | Os03g0605300 | - | Detail |
| CX3g028034 | 3:21,566,308-21,566,475 | - | - | - | - | - | - | Detail |
| CX3g030298 | 3:21,575,141-21,579,220 | - | C1H3g11700 | C2H3g22818 | LOC_Os03g40840 | Os03g0165900 | - | Detail |
| CX3g028391 | 3:21,581,331-21,582,149 | + | C1H3g31311 | C2H3g24067 | - | - | - | Detail |
| CX3g030284 | 3:21,584,907-21,587,745 | + | - | - | LOC_Os03g40900 | Os03g0606200 | RMtATP6 | Detail |
| CX3g025804 | 3:21,591,918-21,593,920 | - | C1H3g15527 | C2H3g29089 | LOC_Os03g40930 | Os03g0606100 | - | Detail |