| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g23130 | 11:19,386,333-19,389,265 | + | C2H11g24934 | CX11g012511 | LOC_Os11g37100 | Os11g0580000 | - | Detail |
| C1H11g00092 | 11:19,393,361-19,395,663 | + | C2H11g17000 | CX11g013679 | LOC_Os11g37110 | Os11g0231800 | - | Detail |
| C1H11g28292 | 11:19,398,324-19,403,428 | - | C2H11g01102 | CX11g014142 | LOC_Os11g37120 | Os11g0580500 | - | Detail |
| C1H11g12578 | 11:19,407,244-19,409,656 | - | C2H11g23038 | CX11g013934 | LOC_Os11g37130 | Os11g0580800 | - | Detail |
| C1H11g24186 | 11:19,428,205-19,430,811 | - | C2H11g26998 | CX11g014891 | LOC_Os11g37330 | Os11g0583200 | - | Detail |
| C1H11g09030 | 11:19,442,621-19,445,535 | - | C2H11g18715 | CX11g013436 | LOC_Os11g37280 | Os11g0582500 | OSC6, Osc6, Osg6B, OsG6B, OsLTPG25, OsLTPg25, OsLtpVII.1, Os C6, C6 | Detail |
| C1H11g28092 | 11:19,447,150-19,448,199 | + | C2H11g08283 | CX11g013075 | LOC_Os11g37270 | Os11g0582400 | - | Detail |
| C1H11g08738 | 11:19,449,934-19,457,019 | - | C2H11g29225 | CX11g011204 | LOC_Os11g37260 | Os11g0582300 | - | Detail |
| C1H11g21581 | 11:19,462,771-19,463,031 | + | C2H11g01637 | CX11g014633 | - | Os11g0582100 | - | Detail |
| C1H11g25944 | 11:19,466,322-19,467,099 | + | C2H11g25233 | CX11g014127 | LOC_Os11g37210 | Os11g0582000 | - | Detail |
| C1H11g24383 | 11:19,468,772-19,469,322 | + | C2H11g25233 | CX11g014127 | LOC_Os11g37210 | Os11g0582000 | - | Detail |
| C1H11g06517 | 11:19,470,792-19,473,990 | - | C2H11g21820 | CX11g012664 | LOC_Os11g37200 | Os11g0581900 | - | Detail |
| C1H11g11900 | 11:19,484,273-19,486,985 | - | C2H11g06568 | - | LOC_Os11g37190 | Os11g0581700 | OsEPFL7 | Detail |
| C1H11g29379 | 11:19,496,978-19,500,677 | + | C2H11g30019 | CX11g013112 | LOC_Os11g37510 | Os11g0585700 | - | Detail |
| C1H11g15811 | 11:19,507,978-19,513,422 | + | C2H11g02296 | CX11g014040 | LOC_Os11g37520 | Os11g0585900 | - | Detail |
| C1H11g28872 | 11:19,516,157-19,565,384 | + | C2H11g07928 | CX11g012778 | LOC_Os11g37540 | Os11g0586100 | Xa46(t) | Detail |
| C1H11g05180 | 11:19,565,677-19,566,674 | - | C2H11g29167 | CX11g014801 | LOC_Os11g37550 | Os11g0586200 | - | Detail |
| C1H11g02737 | 11:19,567,399-19,570,837 | - | C2H11g27585 | CX11g014870 | LOC_Os11g37560 | Os11g0586300 | OsLESV, FLO9 | Detail |
| C1H11g06719 | 11:19,575,124-19,578,017 | + | C2H11g13343 | CX11g011943 | LOC_Os11g37640 | Os11g0586900 | - | Detail |
| C1H11g31000 | 11:19,580,279-19,585,641 | + | C2H11g29893 | CX11g012852 | - | Os11g0587000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026097 | 3:21,380,277-21,384,963 | + | C1H3g17649 | C2H3g17661 | LOC_Os03g40550 | Os03g0602600 | HSA1, OsFLN2, HSA1/OsFLN2 | Detail |
| CX3g026160 | 3:21,389,005-21,394,234 | - | C1H3g14588 | C2H3g06081 | LOC_Os03g40600 | Os03g0603100 | - | Detail |
| CX3g029655 | 3:21,408,767-21,409,003 | - | - | - | - | Os07g0464001 | - | Detail |
| CX3g026123 | 3:21,424,861-21,426,033 | - | - | - | LOC_Os03g40650 | Os03g0603300 | - | Detail |
| CX3g027440 | 3:21,437,681-21,438,094 | - | - | - | - | - | - | Detail |
| CX3g026611 | 3:21,455,200-21,456,726 | + | - | - | - | Os03g0603500 | - | Detail |
| CX3g029684 | 3:21,459,463-21,462,273 | + | C1H3g26758 | C2H3g09028 | LOC_Os03g40670 | Os03g0603600 | - | Detail |
| CX3g028487 | 3:21,463,866-21,464,135 | - | C1H11g16302 | C2H11g04601 | - | - | - | Detail |
| CX3g027402 | 3:21,467,278-21,475,547 | + | C1H3g07265 | C2H3g27980 | LOC_Os03g40690 | Os03g0569800 | - | Detail |
| CX3g028102 | 3:21,477,638-21,478,888 | + | - | - | LOC_Os03g40700 | Os03g0603800 | - | Detail |
| CX3g030467 | 3:21,508,206-21,509,684 | + | - | - | - | Os03g0757950 | - | Detail |
| CX3g030318 | 3:21,520,344-21,520,832 | + | - | - | LOC_Os03g40725 | Os03g0604500 | - | Detail |
| CX3g025313 | 3:21,531,971-21,532,696 | + | C1H3g27392 | C2H3g23447 | LOC_Os03g40770 | Os03g0604566 | - | Detail |
| CX3g029068 | 3:21,534,785-21,539,438 | - | C1H3g29572 | C2H3g01476 | LOC_Os03g40780 | Os03g0604600 | - | Detail |
| CX3g029593 | 3:21,562,757-21,565,048 | + | C1H3g00814 | C2H3g07310 | LOC_Os03g40830 | Os03g0605300 | - | Detail |
| CX3g028034 | 3:21,566,308-21,566,475 | - | - | - | - | - | - | Detail |
| CX3g030298 | 3:21,575,141-21,579,220 | - | C1H3g11700 | C2H3g22818 | LOC_Os03g40840 | Os03g0165900 | - | Detail |
| CX3g028391 | 3:21,581,331-21,582,149 | + | C1H3g31311 | C2H3g24067 | - | - | - | Detail |
| CX3g030284 | 3:21,584,907-21,587,745 | + | - | - | LOC_Os03g40900 | Os03g0606200 | RMtATP6 | Detail |
| CX3g025804 | 3:21,591,918-21,593,920 | - | C1H3g15527 | C2H3g29089 | LOC_Os03g40930 | Os03g0606100 | - | Detail |