| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g16978 | 11:2,030,444-2,030,893 | + | C2H11g03807 | CX11g012617 | LOC_Os11g05450 | Os11g0152025 | - | Detail |
| C1H11g05831 | 11:2,032,625-2,033,527 | - | C2H11g12433 | CX11g011260 | LOC_Os11g05470 | Os11g0152500 | RCN1, FDR2, OsCEN2 | Detail |
| C1H11g07128 | 11:2,046,966-2,051,663 | - | C2H11g23050 | CX11g011558 | LOC_Os11g05480 | Os11g0152700 | - | Detail |
| C1H11g03076 | 11:2,064,753-2,065,124 | - | - | CX11g012314 | LOC_Os11g05490 | Os11g0153000 | - | Detail |
| C1H11g09888 | 11:2,072,629-2,074,005 | + | C2H11g27866 | CX11g014571 | LOC_Os11g05510 | Os11g0153200 | - | Detail |
| C1H11g14387 | 11:2,075,020-2,075,748 | - | - | CX11g011173 | LOC_Os11g05530 | Os11g0153300 | - | Detail |
| C1H11g30434 | 11:2,083,377-2,088,170 | + | C2H11g11180 | CX11g012838 | LOC_Os11g05540 | Os11g0153400 | - | Detail |
| C1H11g27173 | 11:2,090,096-2,090,929 | + | - | CX11g013134 | LOC_Os11g05550 | Os11g0153500 | - | Detail |
| C1H11g12055 | 11:2,095,568-2,099,532 | + | C2H11g09372 | CX11g012625 | LOC_Os11g05556 | Os11g0153600 | OscpSRP54a, PGL14 | Detail |
| C1H11g05202 | 11:2,100,089-2,106,092 | + | C2H11g08825 | CX11g011332 | LOC_Os11g05556 | Os11g0153700 | OscpSRP54b | Detail |
| C1H11g09521 | 11:2,106,667-2,108,424 | + | C2H11g22238 | CX11g013327 | LOC_Os11g05562 | Os11g0153800 | - | Detail |
| C1H11g25458 | 11:2,110,552-2,112,384 | + | C2H11g14891 | - | LOC_Os11g05562 | Os11g0153800 | - | Detail |
| C1H11g16701 | 11:2,114,257-2,116,755 | + | C2H11g02914 | CX11g014614 | LOC_Os11g05570 | Os11g0153900 | LS1 | Detail |
| C1H11g07743 | 11:2,120,175-2,121,476 | - | C2H11g29040 | CX11g012737 | LOC_Os11g05580 | Os11g0594600 | - | Detail |
| C1H11g07502 | 11:2,122,749-2,124,149 | - | C2H11g23951 | CX11g012737 | LOC_Os11g05590 | Os11g0624400 | - | Detail |
| C1H11g23771 | 11:2,125,422-2,125,931 | + | - | CX11g015002 | LOC_Os11g05600 | Os11g0154300 | OsS40-12 | Detail |
| C1H11g25424 | 11:2,134,975-2,135,944 | + | C2H11g00063 | CX11g012312 | LOC_Os11g05614 | Os11g0154500 | - | Detail |
| C1H11g23319 | 11:2,144,354-2,146,702 | + | C2H11g12291 | CX11g011502 | LOC_Os11g05640 | Os11g0154900 | - | Detail |
| C1H11g05763 | 11:2,148,715-2,152,040 | + | C2H11g03607 | CX11g010995 | LOC_Os11g05650 | Os11g0155000 | - | Detail |
| C1H11g07715 | 11:2,152,760-2,153,722 | - | - | CX11g012213 | LOC_Os11g05660 | Os11g0155100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026097 | 3:21,380,277-21,384,963 | + | C1H3g17649 | C2H3g17661 | LOC_Os03g40550 | Os03g0602600 | HSA1, OsFLN2, HSA1/OsFLN2 | Detail |
| CX3g026160 | 3:21,389,005-21,394,234 | - | C1H3g14588 | C2H3g06081 | LOC_Os03g40600 | Os03g0603100 | - | Detail |
| CX3g029655 | 3:21,408,767-21,409,003 | - | - | - | - | Os07g0464001 | - | Detail |
| CX3g026123 | 3:21,424,861-21,426,033 | - | - | - | LOC_Os03g40650 | Os03g0603300 | - | Detail |
| CX3g027440 | 3:21,437,681-21,438,094 | - | - | - | - | - | - | Detail |
| CX3g026611 | 3:21,455,200-21,456,726 | + | - | - | - | Os03g0603500 | - | Detail |
| CX3g029684 | 3:21,459,463-21,462,273 | + | C1H3g26758 | C2H3g09028 | LOC_Os03g40670 | Os03g0603600 | - | Detail |
| CX3g028487 | 3:21,463,866-21,464,135 | - | C1H11g16302 | C2H11g04601 | - | - | - | Detail |
| CX3g027402 | 3:21,467,278-21,475,547 | + | C1H3g07265 | C2H3g27980 | LOC_Os03g40690 | Os03g0569800 | - | Detail |
| CX3g028102 | 3:21,477,638-21,478,888 | + | - | - | LOC_Os03g40700 | Os03g0603800 | - | Detail |
| CX3g030467 | 3:21,508,206-21,509,684 | + | - | - | - | Os03g0757950 | - | Detail |
| CX3g030318 | 3:21,520,344-21,520,832 | + | - | - | LOC_Os03g40725 | Os03g0604500 | - | Detail |
| CX3g025313 | 3:21,531,971-21,532,696 | + | C1H3g27392 | C2H3g23447 | LOC_Os03g40770 | Os03g0604566 | - | Detail |
| CX3g029068 | 3:21,534,785-21,539,438 | - | C1H3g29572 | C2H3g01476 | LOC_Os03g40780 | Os03g0604600 | - | Detail |
| CX3g029593 | 3:21,562,757-21,565,048 | + | C1H3g00814 | C2H3g07310 | LOC_Os03g40830 | Os03g0605300 | - | Detail |
| CX3g028034 | 3:21,566,308-21,566,475 | - | - | - | - | - | - | Detail |
| CX3g030298 | 3:21,575,141-21,579,220 | - | C1H3g11700 | C2H3g22818 | LOC_Os03g40840 | Os03g0165900 | - | Detail |
| CX3g028391 | 3:21,581,331-21,582,149 | + | C1H3g31311 | C2H3g24067 | - | - | - | Detail |
| CX3g030284 | 3:21,584,907-21,587,745 | + | - | - | LOC_Os03g40900 | Os03g0606200 | RMtATP6 | Detail |
| CX3g025804 | 3:21,591,918-21,593,920 | - | C1H3g15527 | C2H3g29089 | LOC_Os03g40930 | Os03g0606100 | - | Detail |