| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g01638 | 12:19,168,136-19,170,832 | + | C2H12g11112 | CX12g017446 | LOC_Os12g38560 | Os12g0573900 | - | Detail |
| C1H12g01733 | 12:19,185,194-19,188,492 | - | C2H12g14541 | CX12g018735 | LOC_Os12g38570 | Os12g0574000 | - | Detail |
| C1H12g11315 | 12:19,200,267-19,209,933 | + | C2H12g27516 | CX12g018184 | LOC_Os12g38590 | Os12g0574400 | - | Detail |
| C1H12g22967 | 12:19,210,943-19,213,015 | - | C2H12g29399 | CX12g016154 | LOC_Os12g38610 | Os12g0574700 | - | Detail |
| C1H12g27164 | 12:19,232,054-19,233,151 | - | C2H12g29632 | CX12g017251 | LOC_Os12g38620 | Os12g0574800 | - | Detail |
| C1H12g15350 | 12:19,233,737-19,238,689 | - | C2H12g21362 | CX12g018328 | LOC_Os12g38630 | Os12g0574900 | - | Detail |
| C1H12g09502 | 12:19,239,778-19,240,434 | - | C2H12g24789 | CX12g015885 | LOC_Os12g38640 | Os12g0575000 | - | Detail |
| C1H12g14366 | 12:19,241,010-19,241,175 | + | - | - | LOC_Os12g38650 | Os12g0575200 | - | Detail |
| C1H12g19934 | 12:19,245,063-19,245,371 | - | C2H12g10258 | CX12g017838 | LOC_Os12g38720 | Os12g0575300 | - | Detail |
| C1H12g12899 | 12:19,256,388-19,259,259 | - | C2H12g00857 | CX12g015511 | LOC_Os12g38730 | Os12g0576300 | - | Detail |
| C1H12g10259 | 12:19,262,646-19,271,551 | - | C2H12g17120 | CX12g016341 | LOC_Os12g38750 | Os12g0576600 | - | Detail |
| C1H12g21793 | 12:19,283,944-19,287,697 | - | C2H12g04894 | CX12g017028 | LOC_Os12g38760 | Os12g0576700 | - | Detail |
| C1H12g30700 | 12:19,289,763-19,292,909 | - | C2H12g26878 | CX12g016600 | LOC_Os12g38770 | Os12g0576750 | PAP1B, OsPAP1b, NPP2, OsNPP2 | Detail |
| C1H12g05519 | 12:19,294,226-19,300,697 | - | C2H12g26810 | CX12g017595 | LOC_Os12g38780 | Os12g0576900 | - | Detail |
| C1H12g22000 | 12:19,303,109-19,305,330 | + | C2H12g06238 | CX12g017201 | LOC_Os12g38790 | Os12g0577000 | - | Detail |
| C1H12g15638 | 12:19,306,400-19,314,241 | + | C2H12g22098 | CX12g016939 | LOC_Os12g38800 | Os12g0577100 | - | Detail |
| C1H12g30406 | 12:19,320,157-19,321,197 | + | C2H12g08874 | CX12g017608 | LOC_Os12g38810 | Os12g0577200 | - | Detail |
| C1H12g21439 | 12:19,341,758-19,346,886 | + | C2H12g22738 | CX12g015208 | LOC_Os12g38850 | Os12g0577600 | - | Detail |
| C1H12g00519 | 12:19,348,331-19,350,779 | - | C2H12g29158 | CX12g018076 | LOC_Os12g38860 | Os12g0577700 | - | Detail |
| C1H12g23780 | 12:19,350,096-19,354,822 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025791 | 3:20,904,463-20,905,229 | - | C1H3g23195 | C2H3g26444 | LOC_Os03g39830 | Os03g0595300 | - | Detail |
| CX3g029922 | 3:20,906,527-20,907,591 | - | C1H3g30408 | C2H3g03313 | LOC_Os03g39850 | Os03g0595600 | - | Detail |
| CX3g026613 | 3:20,910,938-20,914,561 | - | C1H3g25743 | C2H3g11519 | LOC_Os03g39860 | Os03g0595800 | - | Detail |
| CX3g031042 | 3:20,918,823-20,919,149 | - | - | - | LOC_Os03g39870 | Os03g0596101 | - | Detail |
| CX3g025071 | 3:20,925,308-20,928,544 | - | C1H3g12058 | C2H3g18490 | LOC_Os03g39910 | Os03g0596400 | - | Detail |
| CX3g027362 | 3:20,940,827-20,941,597 | + | - | - | LOC_Os03g39980 | Os03g0596700 | - | Detail |
| CX3g028577 | 3:20,944,449-20,945,705 | - | C1H3g14608 | C2H3g19432 | LOC_Os03g40000 | Os03g0596800 | - | Detail |
| CX3g029325 | 3:20,946,664-20,953,372 | - | C1H3g14273 | C2H3g02583 | LOC_Os03g40010 | Os03g0596900 | - | Detail |
| CX3g030669 | 3:20,971,763-20,973,991 | - | C1H3g16422 | C2H3g09880 | LOC_Os03g40020 | Os03g0597200 | YSA | Detail |
| CX3g025021 | 3:20,978,698-20,980,117 | - | C1H3g01921 | C2H3g23840 | LOC_Os03g40040 | Os03g0597400 | - | Detail |
| CX3g029448 | 3:20,983,817-20,987,884 | + | C1H3g16396 | C2H3g01791 | LOC_Os03g40060 | Os03g0712600 | - | Detail |
| CX3g028607 | 3:20,988,404-20,990,989 | - | C1H3g07504 | C2H3g25378 | LOC_Os03g40070 | Os03g0597600 | - | Detail |
| CX3g026000 | 3:20,993,123-20,993,743 | + | - | C2H3g10678 | - | Os03g0204366 | - | Detail |
| CX3g026053 | 3:20,996,812-20,997,158 | - | C1H3g17059 | C2H3g15708 | - | Os03g0597800 | - | Detail |
| CX3g030170 | 3:20,999,007-21,000,452 | + | C1H3g28354 | C2H3g03020 | LOC_Os03g40080 | Os03g0690600 | - | Detail |
| CX3g025955 | 3:21,016,696-21,018,695 | + | C1H3g25847 | C2H3g07741 | LOC_Os03g40100 | Os03g0598100 | - | Detail |
| CX3g025103 | 3:21,020,525-21,026,919 | - | C1H3g09764 | C2H3g15953 | LOC_Os03g40110 | Os03g0598200 | - | Detail |
| CX3g025618 | 3:21,034,076-21,035,636 | - | C1H3g00363 | C2H3g29831 | LOC_Os03g40130 | - | - | Detail |
| CX3g028520 | 3:21,070,843-21,071,136 | + | - | - | - | - | - | Detail |
| CX3g030408 | 3:21,089,898-21,091,745 | + | C1H3g19636 | C2H3g27050 | LOC_Os03g40170 | Os03g0598700 | - | Detail |