| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g16030 | 4:20,604,880-20,606,065 | - | C2H4g00702 | CX4g033693 | LOC_Os04g39590 | Os04g0472100 | - | Detail |
| C1H4g00073 | 4:20,614,279-20,618,635 | + | C2H4g19420 | CX4g034292 | LOC_Os04g39610 | Os04g0472300 | - | Detail |
| C1H4g04352 | 4:20,623,859-20,625,361 | + | C2H4g22876 | CX4g035839 | LOC_Os04g39629 | Os04g0306800 | - | Detail |
| C1H4g27433 | 4:20,627,409-20,631,175 | + | C2H4g22876 | CX4g035839 | LOC_Os04g39629 | Os04g0472400 | - | Detail |
| C1H4g18621 | 4:20,634,438-20,638,146 | + | C2H4g05936 | CX4g035839 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| C1H4g21886 | 4:20,640,550-20,643,687 | + | C2H4g02841 | CX4g035542 | LOC_Os04g39670 | Os04g0472700 | - | Detail |
| C1H4g18594 | 4:20,648,275-20,650,781 | - | C2H4g20727 | CX4g031996 | LOC_Os04g39700 | Os04g0473400 | RPL6 | Detail |
| C1H4g22390 | 4:20,652,338-20,652,839 | - | C2H4g02603 | CX4g036319 | LOC_Os04g39770 | Os04g0473800 | FCP1, FCP1/OsCLE402, Os CLE402, OsCLE402 | Detail |
| C1H4g00302 | 4:20,658,721-20,668,640 | - | C2H4g23069 | CX4g034400 | LOC_Os04g39780 | Os04g0473900 | DWA1 | Detail |
| C1H4g22436 | 4:20,685,532-20,686,945 | - | C2H4g27268 | - | LOC_Os04g39864 | Os04g0474500 | - | Detail |
| C1H4g30851 | 4:20,689,258-20,690,068 | - | C2H4g08296 | - | LOC_Os04g39840 | Os04g0474300 | - | Detail |
| C1H4g08294 | 4:20,693,208-20,698,478 | - | C2H4g06810 | - | LOC_Os04g39840 | Os04g0474500 | - | Detail |
| C1H4g25243 | 4:20,700,221-20,708,124 | - | C2H4g06498 | - | LOC_Os04g39864 | Os04g0474500 | - | Detail |
| C1H4g24332 | 4:20,711,314-20,716,411 | - | C2H4g26901 | - | LOC_Os04g39880 | Os04g0474800 | OsTAGG2, Os4BGlu12 | Detail |
| C1H4g03925 | 4:20,722,945-20,728,104 | - | C2H4g06549 | - | LOC_Os04g39900 | Os04g0474900 | OsTAGG1, Os4BGlu13 | Detail |
| C1H4g27571 | 4:20,730,737-20,733,148 | + | C2H4g15875 | CX4g031592 | LOC_Os04g39910 | Os04g0475100 | SDRLK-61 | Detail |
| C1H4g19181 | 4:20,737,041-20,739,449 | + | C2H4g18216 | CX4g034833 | LOC_Os04g39930 | Os04g0475200 | SDRLK-62 | Detail |
| C1H4g08744 | 4:20,740,948-20,743,475 | + | C2H4g26452 | CX4g033183 | LOC_Os04g39940 | Os04g0475250 | - | Detail |
| C1H4g16959 | 4:20,746,009-20,746,536 | - | C2H4g17863 | CX4g035822 | LOC_Os04g39950 | Os04g0475300 | - | Detail |
| C1H4g29172 | 4:20,749,146-20,750,381 | - | C2H4g05329 | CX4g033449 | LOC_Os04g39970 | Os04g0475500 | OsV4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030172 | 3:20,294,066-20,297,287 | + | C1H3g23142 | C2H3g11586 | LOC_Os03g38480 | Os03g0762900 | - | Detail |
| CX3g031329 | 3:20,299,977-20,300,396 | + | - | - | - | - | - | Detail |
| CX3g027290 | 3:20,301,278-20,303,251 | + | C1H3g26388 | C2H3g06589 | LOC_Os03g38490 | Os03g0581600 | - | Detail |
| CX3g028189 | 3:20,314,110-20,314,361 | + | - | - | - | - | - | Detail |
| CX3g026435 | 3:20,314,946-20,315,686 | + | C1H3g13237 | C2H3g11410 | LOC_Os03g38500 | Os03g0581650 | - | Detail |
| CX3g028447 | 3:20,321,949-20,322,503 | + | C1H3g17977 | C2H3g06922 | LOC_Os03g38520 | Os03g0581800 | - | Detail |
| CX3g027412 | 3:20,330,869-20,332,453 | + | C1H3g14219 | C2H3g10966 | LOC_Os03g38540 | Os03g0582000 | - | Detail |
| CX3g028106 | 3:20,333,753-20,335,705 | - | C1H3g04338 | C2H3g04652 | LOC_Os03g38580 | Os03g0582100 | - | Detail |
| CX3g025759 | 3:20,339,242-20,342,298 | - | C1H3g18500 | C2H3g02001 | LOC_Os03g38590 | Os03g0582200 | - | Detail |
| CX3g029015 | 3:20,350,897-20,351,646 | - | C1H3g02242 | C2H3g26951 | LOC_Os03g38610 | Os03g0582400 | MADS87, OsMADS87 | Detail |
| CX3g028228 | 3:20,379,682-20,380,884 | + | - | - | LOC_Os03g38640 | Os03g0582800 | - | Detail |
| CX3g028120 | 3:20,383,137-20,383,346 | + | - | - | - | Os03g0582900 | - | Detail |
| CX3g029359 | 3:20,383,923-20,385,900 | + | C1H3g13726 | C2H3g25116 | - | - | - | Detail |
| CX3g028203 | 3:20,386,883-20,389,504 | - | C1H3g28190 | C2H3g00374 | LOC_Os03g38710 | Os03g0583600 | OsPERK3 | Detail |
| CX3g030262 | 3:20,392,654-20,392,908 | - | C1H12g24303 | - | LOC_Os10g02314 | - | - | Detail |
| CX3g026919 | 3:20,393,535-20,396,644 | + | C1H3g03200 | C2H3g24537 | LOC_Os03g38720 | Os03g0583700 | OsUMP1 | Detail |
| CX3g030948 | 3:20,402,244-20,404,330 | + | C1H3g23310 | C2H3g24800 | LOC_Os03g38730 | Os03g0583800 | - | Detail |
| CX3g030903 | 3:20,405,095-20,408,190 | - | C1H3g04436 | C2H3g29289 | LOC_Os03g38740 | Os03g0583900 | - | Detail |
| CX3g025333 | 3:20,409,037-20,416,823 | - | C1H3g04436 | C2H3g29289 | LOC_Os03g38740 | Os03g0583900 | - | Detail |
| CX3g028700 | 3:20,428,212-20,430,599 | + | C1H3g11527 | C2H3g13791 | LOC_Os03g38790 | Os03g0568500 | - | Detail |