| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g01892 | 10:10,437,095-10,437,779 | - | C1H10g22659 | - | - | - | - | Detail |
| C2H10g28252 | 10:10,455,310-10,459,721 | + | C1H10g20546 | CX10g008168 | LOC_Os10g21460 | Os10g0358600 | - | Detail |
| C2H10g12273 | 10:10,461,766-10,464,428 | - | C1H10g14022 | CX10g010475 | LOC_Os10g21470 | Os10g0358700 | - | Detail |
| C2H10g29078 | 10:10,474,124-10,476,644 | - | C1H10g29945 | CX10g009930 | LOC_Os10g21490 | - | - | Detail |
| C2H10g02652 | 10:10,488,771-10,489,913 | + | C1H10g16528 | CX10g008439 | LOC_Os10g21540 | Os10g0359200 | - | Detail |
| C2H10g18902 | 10:10,498,404-10,501,797 | - | C1H10g18664 | CX10g009618 | LOC_Os10g21560 | Os10g0359500 | - | Detail |
| C2H10g05637 | 10:10,514,587-10,516,735 | - | C1H10g18874 | CX10g010522 | LOC_Os10g21590 | Os10g0360100 | - | Detail |
| C2H10g27251 | 10:10,521,535-10,522,304 | - | C1H10g17548 | - | - | - | - | Detail |
| C2H10g25817 | 10:10,529,597-10,529,976 | - | C1H10g10032 | - | - | - | - | Detail |
| C2H10g24961 | 10:10,536,850-10,540,537 | + | C1H10g30481 | CX10g007795 | LOC_Os10g21800 | Os10g0360800 | - | Detail |
| C2H10g25330 | 10:10,542,442-10,547,040 | + | - | - | - | - | - | Detail |
| C2H10g16627 | 10:10,543,097-10,546,184 | - | C1H10g19484 | CX10g010771 | LOC_Os10g21660 | - | - | Detail |
| C2H10g16136 | 10:10,557,714-10,558,349 | - | C1H5g20408 | - | - | - | - | Detail |
| C2H10g16733 | 10:10,563,595-10,563,995 | + | - | - | - | - | - | Detail |
| C2H10g30610 | 10:10,564,877-10,565,523 | + | - | - | - | - | - | Detail |
| C2H10g05328 | 10:10,572,798-10,573,292 | + | C1H10g15818 | CX10g007732 | LOC_Os10g21670 | Os10g0361000 | - | Detail |
| C2H10g20812 | 10:10,588,844-10,589,320 | + | C1H10g09092 | CX10g009951 | LOC_Os10g21670 | Os10g0361300 | - | Detail |
| C2H10g05563 | 10:10,600,692-10,601,414 | - | C1H10g28163 | CX10g007540 | - | - | - | Detail |
| C2H10g24548 | 10:10,604,322-10,604,825 | + | C1H10g27379 | CX10g008677 | LOC_Os10g21790 | Os10g0361900 | - | Detail |
| C2H10g01089 | 10:10,609,788-10,621,213 | - | C1H10g20202 | CX10g010859 | LOC_Os10g21810 | Os10g0362300 | HK5, OHK3b, OHK3, HK, OsHK5, Crl3, Ohk3, OsHK2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029823 | 3:19,982,285-19,985,182 | + | C1H3g31871 | C2H3g29757 | LOC_Os03g38020 | Os03g0577200 | OsMOB1A | Detail |
| CX3g027636 | 3:19,997,448-20,001,841 | - | C1H3g25648 | C2H3g00261 | LOC_Os03g38050 | Os03g0577500 | - | Detail |
| CX3g030737 | 3:20,011,142-20,011,441 | + | - | - | - | - | - | Detail |
| CX3g030883 | 3:20,038,513-20,044,627 | - | C1H3g30456 | C2H3g08089 | LOC_Os03g38120 | Os03g0578200 | - | Detail |
| CX3g029399 | 3:20,051,808-20,052,014 | - | - | - | - | - | - | Detail |
| CX3g031195 | 3:20,062,225-20,062,629 | + | - | C2H4g17846 | - | Os04g0622400 | - | Detail |
| CX3g025437 | 3:20,078,579-20,079,004 | + | - | - | LOC_Os03g38170 | Os03g0578500 | - | Detail |
| CX3g029840 | 3:20,081,970-20,082,200 | - | - | C2H4g03445 | - | - | - | Detail |
| CX3g028677 | 3:20,106,404-20,109,070 | + | C1H3g00373 | C2H3g01736 | LOC_Os03g38210 | Os03g0578900 | OsGAMYBL2 | Detail |
| CX3g031078 | 3:20,121,357-20,122,607 | - | C1H3g03850 | C2H3g08135 | LOC_Os03g38230 | Os03g0579000 | - | Detail |
| CX3g028199 | 3:20,125,489-20,134,121 | + | C1H3g17856 | C2H3g26439 | LOC_Os03g38250 | Os03g0579200 | - | Detail |
| CX3g031152 | 3:20,135,154-20,137,164 | - | C1H3g30161 | C2H3g04801 | LOC_Os03g38260 | Os03g0579300 | - | Detail |
| CX3g030876 | 3:20,163,199-20,167,065 | + | C1H3g19661 | C2H3g22136 | LOC_Os03g38330 | Os03g0579900 | - | Detail |
| CX3g028906 | 3:20,168,728-20,173,469 | - | C1H3g30114 | C2H3g16131 | LOC_Os03g38470 | Os03g0580200 | - | Detail |
| CX3g028298 | 3:20,187,508-20,187,660 | + | - | - | LOC_Os04g20240 | - | - | Detail |
| CX3g028223 | 3:20,204,678-20,214,509 | - | C1H3g15849 | C2H3g06939 | LOC_Os03g38400 | Os03g0580800 | - | Detail |
| CX3g029128 | 3:20,231,087-20,232,477 | - | C1H10g14287 | C2H11g04067 | - | Os03g0732200 | - | Detail |
| CX3g026039 | 3:20,239,853-20,240,461 | + | - | - | - | - | - | Detail |
| CX3g029909 | 3:20,253,180-20,256,464 | - | C1H3g29283 | C2H3g29291 | LOC_Os03g38470 | Os03g0581400 | - | Detail |
| CX3g027213 | 3:20,282,335-20,282,484 | + | - | - | LOC_Os12g33650 | Os11g0476333 | - | Detail |