| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g16451 | 6:9,565,443-9,572,739 | - | C2H6g22125 | CX6g041237 | LOC_Os06g20040 | Os06g0304600 | - | Detail |
| C1H6g08869 | 6:9,592,391-9,602,634 | + | C2H6g11429 | CX6g041532 | LOC_Os06g20090 | Os06g0305200 | - | Detail |
| C1H6g20121 | 6:9,603,797-9,605,031 | - | - | - | - | - | - | Detail |
| C1H6g11013 | 6:9,619,499-9,620,995 | + | C2H6g14592 | CX6g042324 | LOC_Os06g20110 | Os06g0305400 | - | Detail |
| C1H6g06042 | 6:9,622,456-9,624,509 | + | C2H6g07528 | CX6g042324 | LOC_Os06g20120 | Os06g0305400 | - | Detail |
| C1H6g25354 | 6:9,628,592-9,631,862 | + | C2H6g07470 | CX6g045687 | LOC_Os06g20140 | Os06g0118000 | - | Detail |
| C1H6g00755 | 6:9,638,057-9,638,511 | + | C2H6g06402 | CX6g045294 | LOC_Os06g20180 | Os06g0306500 | - | Detail |
| C1H6g18397 | 6:9,640,476-9,645,548 | + | C2H6g06402 | CX6g045294 | LOC_Os06g20190 | Os06g0306500 | - | Detail |
| C1H6g22866 | 6:9,678,289-9,679,067 | + | - | - | - | - | - | Detail |
| C1H6g10015 | 6:9,684,050-9,686,449 | - | C2H6g20586 | CX6g043850 | LOC_Os06g21920 | Os06g0324800 | PT9, OsPT9, PHT1-9, OsPht1;9 | Detail |
| C1H6g02709 | 6:9,694,762-9,695,096 | + | C2H6g00738 | CX6g042175 | LOC_Os06g21910 | Os06g0324400 | - | Detail |
| C1H6g04429 | 6:9,704,253-9,708,011 | - | C2H6g18039 | CX6g045787 | LOC_Os06g21900 | Os06g0324300 | - | Detail |
| C1H6g19731 | 6:9,764,813-9,766,491 | - | C2H6g06621 | CX6g041388 | LOC_Os06g21820 | Os06g0323100 | - | Detail |
| C1H6g31747 | 6:9,795,947-9,797,603 | - | C2H6g06621 | CX6g041388 | LOC_Os06g21720 | Os06g0322400 | - | Detail |
| C1H6g09993 | 6:9,861,008-9,866,744 | + | C2H6g15965 | CX6g043034 | LOC_Os06g21600 | Os06g0320700 | - | Detail |
| C1H6g29854 | 6:9,869,699-9,871,226 | - | C2H6g07045 | CX6g043863 | LOC_Os06g21590 | Os06g0320500 | - | Detail |
| C1H6g30433 | 6:9,872,942-9,874,529 | + | - | - | - | - | - | Detail |
| C1H6g15151 | 6:9,884,288-9,888,894 | + | C2H6g13117 | CX6g043671 | LOC_Os06g21570 | Os06g0320200 | Os6BGlu24 | Detail |
| C1H6g07888 | 6:9,889,277-9,892,648 | - | C2H6g00743 | CX6g044452 | LOC_Os06g21560 | Os06g0320100 | - | Detail |
| C1H6g14935 | 6:9,895,203-9,895,714 | + | C2H6g30426 | CX6g045633 | LOC_Os06g21550 | Os06g0320000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026652 | 3:19,385,562-19,385,987 | + | C1H3g00076 | - | - | - | - | Detail |
| CX3g027468 | 3:19,388,119-19,391,867 | - | C1H3g03992 | C2H3g02382 | LOC_Os03g36900 | Os03g0566500 | - | Detail |
| CX3g026657 | 3:19,396,382-19,398,709 | + | C1H3g30925 | C2H3g13499 | LOC_Os03g36910 | Os03g0566600 | - | Detail |
| CX3g025200 | 3:19,399,440-19,402,710 | - | C1H3g18058 | C2H3g26454 | LOC_Os03g36920 | Os03g0566700 | - | Detail |
| CX3g027874 | 3:19,404,138-19,408,269 | - | C1H3g23101 | C2H3g29578 | LOC_Os03g36930 | Os03g0566800 | OsRH34 | Detail |
| CX3g030082 | 3:19,417,783-19,418,130 | - | - | - | LOC_Os03g36960 | Os03g0567100 | - | Detail |
| CX3g026662 | 3:19,423,420-19,426,296 | - | C1H3g16061 | C2H3g07333 | LOC_Os03g37010 | Os03g0567600 | - | Detail |
| CX3g025904 | 3:19,448,710-19,448,935 | - | - | - | - | - | - | Detail |
| CX3g025716 | 3:19,449,644-19,451,606 | + | C1H3g08263 | C2H3g20404 | LOC_Os03g37080 | Os03g0568400 | - | Detail |
| CX3g029847 | 3:19,452,436-19,454,934 | - | C1H3g01309 | C2H3g17716 | LOC_Os03g37090 | Os03g0568500 | - | Detail |
| CX3g026252 | 3:19,458,518-19,460,011 | + | C1H3g18739 | C2H3g18006 | LOC_Os03g37100 | Os03g0568600 | - | Detail |
| CX3g027192 | 3:19,465,027-19,467,661 | + | C1H3g05688 | C2H3g16322 | LOC_Os03g37120 | Os03g0568800 | - | Detail |
| CX3g029489 | 3:19,468,291-19,473,076 | - | C1H3g03504 | C2H3g06254 | LOC_Os03g37130 | Os03g0568900 | - | Detail |
| CX3g027195 | 3:19,480,711-19,481,121 | - | - | - | - | - | - | Detail |
| CX3g025311 | 3:19,486,425-19,488,263 | - | C1H3g26605 | C2H3g17441 | LOC_Os03g37140 | Os03g0569000 | - | Detail |
| CX3g029497 | 3:19,497,866-19,498,018 | - | - | - | - | - | - | Detail |
| CX3g028488 | 3:19,498,949-19,499,122 | + | - | - | - | - | - | Detail |
| CX3g030124 | 3:19,507,071-19,507,454 | - | C1H3g00059 | C2H3g20952 | LOC_Os03g37250 | Os03g0371800 | - | Detail |
| CX3g025930 | 3:19,508,345-19,510,273 | + | C1H3g16422 | C2H3g09880 | LOC_Os03g37260 | Os03g0569800 | - | Detail |
| CX3g028524 | 3:19,523,659-19,524,987 | - | C1H3g31240 | C2H3g04834 | LOC_Os03g37270 | Os03g0569900 | - | Detail |