| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g01627 | 2:32,511,168-32,515,334 | - | C1H2g11754 | CX2g023481 | LOC_Os02g58280 | Os02g0829600 | - | Detail |
| C2H2g10073 | 2:32,518,841-32,520,115 | - | C1H2g11866 | CX2g021237 | LOC_Os02g58300 | Os02g0829800 | - | Detail |
| C2H2g27848 | 2:32,522,197-32,523,733 | - | C1H2g28907 | CX2g019654 | - | Os02g0829900 | - | Detail |
| C2H2g28475 | 2:32,524,059-32,525,579 | + | C1H2g19195 | CX2g023390 | LOC_Os02g58330 | Os02g0830000 | - | Detail |
| C2H2g28933 | 2:32,525,777-32,530,758 | - | C1H2g15905 | CX2g021002 | LOC_Os02g58340 | Os02g0830100 | - | Detail |
| C2H2g24710 | 2:32,531,783-32,532,570 | - | C1H2g26748 | CX2g021148 | LOC_Os02g58350 | Os02g0830200 | RR3, OSRR3, OsRR3, rr3, Rra7, OsRRA7 | Detail |
| C2H2g15978 | 2:32,535,185-32,541,672 | - | C1H2g04850 | CX2g019480 | LOC_Os02g58360 | Os02g0830300 | - | Detail |
| C2H2g08698 | 2:32,543,413-32,543,914 | - | - | - | LOC_Os02g58370 | - | - | Detail |
| C2H2g08236 | 2:32,548,613-32,550,447 | + | - | - | LOC_Os02g56360 | Os02g0807700 | - | Detail |
| C2H2g05318 | 2:32,553,834-32,558,763 | - | C1H2g28740 | CX2g019366 | LOC_Os02g58390 | Os02g0830700 | - | Detail |
| C2H2g10655 | 2:32,566,407-32,579,625 | + | C1H2g11087 | CX2g020528 | LOC_Os02g58410 | Os02g0830900 | - | Detail |
| C2H2g19559 | 2:32,580,368-32,583,966 | + | C1H2g31609 | CX2g021714 | LOC_Os02g58440 | Os02g0831100 | - | Detail |
| C2H2g28296 | 2:32,584,245-32,585,751 | - | C1H2g06401 | CX2g024319 | LOC_Os02g58450 | Os02g0831200 | - | Detail |
| C2H2g15828 | 2:32,585,997-32,589,628 | - | C1H2g24307 | CX2g019335 | LOC_Os02g58460 | Os02g0831300 | - | Detail |
| C2H2g19806 | 2:32,590,441-32,591,983 | - | C1H2g27225 | CX2g019757 | LOC_Os02g58470 | Os02g0831400 | - | Detail |
| C2H2g04977 | 2:32,593,677-32,597,979 | + | C1H2g26348 | CX2g021473 | LOC_Os02g58480 | Os02g0831500 | - | Detail |
| C2H2g27331 | 2:32,597,917-32,605,263 | - | C1H2g08362 | CX2g020627 | LOC_Os02g58490 | Os02g0831600 | OsAGO1, AGO1 | Detail |
| C2H2g04523 | 2:32,607,668-32,608,612 | - | C1H2g10055 | CX2g024485 | LOC_Os02g58500 | Os02g0831700 | PLA2-I | Detail |
| C2H2g23374 | 2:32,608,771-32,611,347 | + | C1H2g07202 | CX2g020094 | LOC_Os02g58510 | Os02g0831800 | - | Detail |
| C2H2g07627 | 2:32,611,612-32,613,399 | + | C1H2g30272 | CX2g023764 | LOC_Os02g58520 | Os02g0832000 | OsCPK6 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026628 | 3:18,617,267-18,621,328 | + | C1H3g05109 | C2H3g23939 | LOC_Os03g35600 | Os03g0556600 | SDRLK-20 | Detail |
| CX3g025059 | 3:18,641,639-18,642,331 | - | - | - | LOC_Os08g23520 | Os08g0324600 | - | Detail |
| CX3g031176 | 3:18,683,449-18,683,757 | - | - | C2H3g10319 | - | - | - | Detail |
| CX3g026327 | 3:18,702,117-18,702,476 | - | - | - | - | - | - | Detail |
| CX3g027346 | 3:18,729,564-18,730,268 | - | - | - | LOC_Os03g35920 | Os03g0558700 | - | Detail |
| CX3g028334 | 3:18,855,629-18,856,363 | - | - | - | LOC_Os03g36080 | Os03g0559700 | - | Detail |
| CX3g027016 | 3:18,864,614-18,864,829 | + | - | - | - | Os03g0752000 | - | Detail |
| CX3g025780 | 3:18,921,284-18,921,838 | - | - | - | - | Os03g0560050 | - | Detail |
| CX3g030465 | 3:18,941,898-18,942,395 | + | - | - | - | - | - | Detail |
| CX3g027909 | 3:18,951,447-18,951,794 | + | - | - | - | - | - | Detail |
| CX3g028806 | 3:19,005,564-19,006,157 | + | - | - | LOC_Os07g17100 | - | - | Detail |
| CX3g029576 | 3:19,036,108-19,036,746 | + | - | - | - | - | - | Detail |
| CX3g027815 | 3:19,047,338-19,047,748 | + | - | - | - | - | - | Detail |
| CX3g025966 | 3:19,051,843-19,052,097 | - | C1H12g24303 | - | LOC_Os10g02314 | - | - | Detail |
| CX3g028586 | 3:19,057,357-19,057,575 | - | - | - | - | - | - | Detail |
| CX3g026625 | 3:19,103,990-19,104,433 | - | C1H3g18372 | C2H3g08461 | LOC_Os03g36439 | Os03g0562200 | - | Detail |
| CX3g025527 | 3:19,116,137-19,116,520 | - | C1H3g09057 | C2H3g19324 | - | Os03g0562200 | - | Detail |
| CX3g027448 | 3:19,168,062-19,168,262 | + | - | C2H3g10564 | - | Os03g0199200 | - | Detail |
| CX3g030881 | 3:19,186,005-19,189,809 | + | C1H3g31570 | C2H3g18751 | LOC_Os03g36530 | Os03g0563100 | - | Detail |
| CX3g027657 | 3:19,194,461-19,195,954 | - | C1H3g17857 | C2H3g06195 | LOC_Os03g36540 | Os03g0563300 | ELL, OsCHLI | Detail |