| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g27784 | 4:4,265,490-4,270,161 | + | C1H4g06403 | CX4g031382 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| C2H4g16323 | 4:4,310,620-4,311,495 | - | C1H4g22795 | CX4g034531 | LOC_Os09g03190 | Os09g0120033 | - | Detail |
| C2H4g08316 | 4:4,319,605-4,320,129 | - | C1H4g22795 | CX4g031393 | - | - | - | Detail |
| C2H4g22590 | 4:4,337,572-4,340,092 | - | C1H4g23989 | CX4g034441 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| C2H4g26043 | 4:4,356,141-4,358,053 | - | C1H4g13047 | CX4g033229 | LOC_Os04g09430 | Os04g0171800 | - | Detail |
| C2H4g09296 | 4:4,361,734-4,363,000 | - | C1H4g12448 | CX4g035209 | LOC_Os04g09520 | Os04g0462200 | - | Detail |
| C2H4g30137 | 4:4,376,394-4,376,702 | - | - | - | - | - | - | Detail |
| C2H4g18023 | 4:4,385,699-4,390,720 | - | C1H4g15809 | CX4g033765 | LOC_Os04g09530 | Os04g0174800 | - | Detail |
| C2H4g07222 | 4:4,401,854-4,404,889 | + | C1H4g04587 | CX4g031895 | LOC_Os04g09540 | Os04g0174900 | - | Detail |
| C2H4g13106 | 4:4,425,822-4,427,132 | - | C1H4g04828 | CX4g034555 | LOC_Os04g09590 | Os04g0175500 | - | Detail |
| C2H4g19878 | 4:4,436,010-4,438,861 | + | C1H4g25500 | CX4g033442 | LOC_Os04g09604 | Os04g0175600 | - | Detail |
| C2H4g01777 | 4:4,461,196-4,464,807 | + | C1H4g27776 | CX4g036641 | LOC_Os04g09654 | Os04g0175900 | - | Detail |
| C2H4g17556 | 4:4,464,957-4,466,942 | + | C1H4g27776 | CX4g032305 | LOC_Os12g30444 | - | - | Detail |
| C2H4g23631 | 4:4,465,445-4,465,862 | - | - | - | - | - | - | Detail |
| C2H4g06147 | 4:4,473,071-4,473,958 | + | C1H4g04322 | CX4g031947 | LOC_Os04g09654 | Os04g0175900 | - | Detail |
| C2H4g04542 | 4:4,477,617-4,482,183 | - | C1H4g25500 | CX4g031947 | LOC_Os04g09670 | Os04g0176200 | - | Detail |
| C2H4g19699 | 4:4,497,823-4,503,279 | - | C1H4g00886 | CX4g031672 | LOC_Os04g09720 | Os04g0176400 | - | Detail |
| C2H4g05769 | 4:4,555,087-4,555,782 | - | C1H4g18497 | CX4g032484 | LOC_Os04g09780 | Os04g0177100 | - | Detail |
| C2H4g27475 | 4:4,562,393-4,568,186 | - | C1H4g30399 | CX4g034078 | LOC_Os04g09800 | Os04g0177300 | OsCHR735, CHR735 | Detail |
| C2H4g20561 | 4:4,570,947-4,572,941 | - | C1H4g22479 | CX4g034820 | LOC_Os04g09810 | Os04g0177400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031081 | 3:17,692,504-17,692,917 | + | - | - | LOC_Os10g21290 | - | - | Detail |
| CX3g025469 | 3:17,694,173-17,698,245 | + | C1H3g11876 | C2H3g09597 | LOC_Os03g33650 | Os03g0449200 | SHL4, SHO2, SHO2/SHL4, OsAGO7 | Detail |
| CX3g028866 | 3:17,765,698-17,767,029 | - | C1H3g10349 | C2H3g06387 | LOC_Os03g33012 | Os03g0444900 | OsWRKY33, OsWRKY81 | Detail |
| CX3g029119 | 3:17,782,982-17,783,206 | - | - | - | - | - | - | Detail |
| CX3g031033 | 3:17,838,649-17,838,990 | - | - | - | - | - | - | Detail |
| CX3g030655 | 3:17,849,957-17,850,241 | + | - | - | - | - | - | Detail |
| CX3g028136 | 3:17,889,721-17,889,909 | + | - | - | - | - | - | Detail |
| CX3g026882 | 3:17,892,865-17,893,136 | - | - | - | - | - | - | Detail |
| CX3g031079 | 3:17,900,750-17,904,615 | - | C1H3g16808 | C2H3g04259 | LOC_Os03g34040 | Os03g0452300 | - | Detail |
| CX3g030667 | 3:17,905,934-17,906,149 | + | C1H3g15118 | C2H3g19200 | - | Os03g0789600 | - | Detail |
| CX3g027872 | 3:17,943,783-17,944,181 | + | - | C2H3g26683 | - | Os03g0454300 | - | Detail |
| CX3g026859 | 3:17,967,213-17,968,434 | + | C1H3g08800 | C2H3g20904 | LOC_Os03g34280 | Os03g0453800 | - | Detail |
| CX3g026277 | 3:17,972,463-17,972,838 | + | C1H3g25648 | C2H3g00261 | - | Os03g0577500 | - | Detail |
| CX3g031021 | 3:17,974,325-17,975,118 | + | C1H3g06458 | C2H3g03414 | LOC_Os08g09860 | Os03g0786100 | - | Detail |
| CX3g029928 | 3:17,977,212-17,977,424 | + | - | - | - | - | - | Detail |
| CX3g026131 | 3:17,978,622-17,979,189 | + | C1H3g13672 | C2H3g06895 | - | - | - | Detail |
| CX3g029473 | 3:17,979,634-17,979,939 | + | - | C2H3g06895 | LOC_Os04g25784 | Os04g0323800 | - | Detail |
| CX3g028089 | 3:17,984,141-17,990,925 | - | C1H3g14005 | C2H3g12265 | LOC_Os03g34300 | Os03g0454100 | - | Detail |
| CX3g028850 | 3:17,994,439-17,994,828 | + | - | C2H3g26683 | - | Os03g0454300 | - | Detail |
| CX3g029837 | 3:18,048,342-18,048,704 | + | - | - | - | - | - | Detail |