| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g22314 | 2:10,262,566-10,265,109 | + | C2H2g04043 | CX2g020939 | LOC_Os02g19170 | Os02g0293800 | - | Detail |
| C1H2g19051 | 2:10,266,002-10,266,799 | - | C2H2g22356 | CX2g023300 | LOC_Os02g19180 | Os02g0293900 | - | Detail |
| C1H2g14610 | 2:10,269,471-10,272,958 | - | C2H2g04664 | - | - | - | - | Detail |
| C1H2g30462 | 2:10,276,381-10,277,427 | + | C2H2g10793 | CX2g021743 | LOC_Os02g19380 | Os02g0294000 | - | Detail |
| C1H2g16318 | 2:10,282,119-10,283,387 | - | - | CX2g022754 | LOC_Os02g19200 | Os02g0294100 | - | Detail |
| C1H2g06538 | 2:10,288,484-10,294,765 | + | C2H2g23302 | CX2g024663 | LOC_Os02g19210 | Os02g0294600 | - | Detail |
| C1H2g04325 | 2:10,298,052-10,306,915 | - | C2H2g17946 | CX2g023610 | LOC_Os02g19220 | Os02g0294700 | - | Detail |
| C1H2g17594 | 2:10,308,996-10,309,388 | + | C2H2g13897 | - | - | Os02g0467300 | - | Detail |
| C1H2g23146 | 2:10,328,871-10,330,708 | - | - | CX2g020895 | - | Os06g0470500 | - | Detail |
| C1H2g29349 | 2:10,366,557-10,367,012 | + | C2H2g13295 | CX2g023642 | - | - | - | Detail |
| C1H2g13551 | 2:10,370,502-10,371,908 | + | C2H2g13295 | - | LOC_Os02g19280 | - | - | Detail |
| C1H2g09019 | 2:10,392,004-10,399,572 | - | C2H2g10272 | CX2g019687 | LOC_Os02g19330 | Os02g0295700 | - | Detail |
| C1H2g04273 | 2:10,403,215-10,407,546 | - | C2H2g22150 | CX2g024362 | LOC_Os02g19420 | Os02g0296400 | - | Detail |
| C1H2g09759 | 2:10,423,341-10,426,010 | + | C2H2g07281 | CX2g021654 | - | Os02g0594166 | - | Detail |
| C1H2g18879 | 2:10,428,202-10,433,465 | - | C2H2g17676 | - | LOC_Os02g19440 | Os02g0296800 | - | Detail |
| C1H2g08473 | 2:10,436,631-10,439,155 | + | C2H2g09661 | CX2g020745 | LOC_Os02g19450 | Os02g0297132 | - | Detail |
| C1H2g29514 | 2:10,450,301-10,450,660 | + | C2H2g12511 | CX2g019332 | - | Os02g0808300 | - | Detail |
| C1H2g12440 | 2:10,453,572-10,453,787 | - | C2H2g00010 | CX2g020667 | LOC_Os02g19470 | Os02g0297200 | - | Detail |
| C1H2g25591 | 2:10,454,266-10,456,305 | - | C2H2g00010 | CX2g020667 | LOC_Os02g19470 | Os02g0297200 | - | Detail |
| C1H2g23708 | 2:10,484,058-10,488,327 | + | C2H2g09993 | CX2g021008 | LOC_Os02g19510 | Os02g0297600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031081 | 3:17,692,504-17,692,917 | + | - | - | LOC_Os10g21290 | - | - | Detail |
| CX3g025469 | 3:17,694,173-17,698,245 | + | C1H3g11876 | C2H3g09597 | LOC_Os03g33650 | Os03g0449200 | SHL4, SHO2, SHO2/SHL4, OsAGO7 | Detail |
| CX3g028866 | 3:17,765,698-17,767,029 | - | C1H3g10349 | C2H3g06387 | LOC_Os03g33012 | Os03g0444900 | OsWRKY33, OsWRKY81 | Detail |
| CX3g029119 | 3:17,782,982-17,783,206 | - | - | - | - | - | - | Detail |
| CX3g031033 | 3:17,838,649-17,838,990 | - | - | - | - | - | - | Detail |
| CX3g030655 | 3:17,849,957-17,850,241 | + | - | - | - | - | - | Detail |
| CX3g028136 | 3:17,889,721-17,889,909 | + | - | - | - | - | - | Detail |
| CX3g026882 | 3:17,892,865-17,893,136 | - | - | - | - | - | - | Detail |
| CX3g031079 | 3:17,900,750-17,904,615 | - | C1H3g16808 | C2H3g04259 | LOC_Os03g34040 | Os03g0452300 | - | Detail |
| CX3g030667 | 3:17,905,934-17,906,149 | + | C1H3g15118 | C2H3g19200 | - | Os03g0789600 | - | Detail |
| CX3g027872 | 3:17,943,783-17,944,181 | + | - | C2H3g26683 | - | Os03g0454300 | - | Detail |
| CX3g026859 | 3:17,967,213-17,968,434 | + | C1H3g08800 | C2H3g20904 | LOC_Os03g34280 | Os03g0453800 | - | Detail |
| CX3g026277 | 3:17,972,463-17,972,838 | + | C1H3g25648 | C2H3g00261 | - | Os03g0577500 | - | Detail |
| CX3g031021 | 3:17,974,325-17,975,118 | + | C1H3g06458 | C2H3g03414 | LOC_Os08g09860 | Os03g0786100 | - | Detail |
| CX3g029928 | 3:17,977,212-17,977,424 | + | - | - | - | - | - | Detail |
| CX3g026131 | 3:17,978,622-17,979,189 | + | C1H3g13672 | C2H3g06895 | - | - | - | Detail |
| CX3g029473 | 3:17,979,634-17,979,939 | + | - | C2H3g06895 | LOC_Os04g25784 | Os04g0323800 | - | Detail |
| CX3g028089 | 3:17,984,141-17,990,925 | - | C1H3g14005 | C2H3g12265 | LOC_Os03g34300 | Os03g0454100 | - | Detail |
| CX3g028850 | 3:17,994,439-17,994,828 | + | - | C2H3g26683 | - | Os03g0454300 | - | Detail |
| CX3g029837 | 3:18,048,342-18,048,704 | + | - | - | - | - | - | Detail |