| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02942 | 1:30,031,566-30,034,970 | + | C2H1g13385 | CX1g000031 | LOC_Os01g58240 | Os01g0794800 | - | Detail |
| C1H1g25833 | 1:30,032,232-30,036,904 | - | C2H1g21351 | - | - | - | - | Detail |
| C1H1g25653 | 1:30,039,800-30,047,154 | + | C2H1g29117 | CX1g000031 | LOC_Os01g58240 | Os01g0795000 | RSP1 | Detail |
| C1H1g21214 | 1:30,049,868-30,054,395 | + | C2H1g27055 | CX1g000031 | LOC_Os01g58270 | Os01g0795100 | - | Detail |
| C1H1g12866 | 1:30,057,062-30,057,763 | - | - | - | - | - | - | Detail |
| C1H1g23689 | 1:30,059,471-30,062,823 | + | C2H1g17970 | CX1g000031 | LOC_Os01g58280 | Os01g0795200 | - | Detail |
| C1H1g13842 | 1:30,066,199-30,070,778 | + | C2H1g21575 | CX1g000031 | LOC_Os01g58290 | Os01g0795400 | Hwi2 | Detail |
| C1H1g19856 | 1:30,072,039-30,072,287 | + | C2H1g04222 | - | LOC_Os01g58310 | Os01g0795600 | - | Detail |
| C1H1g00284 | 1:30,073,389-30,073,613 | + | C2H1g14294 | - | LOC_Os01g58340 | Os01g0795900 | - | Detail |
| C1H1g24727 | 1:30,080,859-30,081,098 | + | C2H1g04222 | - | LOC_Os01g58310 | Os01g0795900 | - | Detail |
| C1H1g15205 | 1:30,092,878-30,095,404 | + | C2H1g23146 | CX1g003893 | LOC_Os01g58380 | Os01g0796400 | - | Detail |
| C1H1g14537 | 1:30,095,888-30,097,988 | - | C2H1g07599 | CX1g005123 | LOC_Os01g58390 | Os01g0796500 | - | Detail |
| C1H1g28486 | 1:30,101,988-30,106,936 | - | C2H1g05560 | CX1g003555 | LOC_Os01g58400 | Os01g0796700 | - | Detail |
| C1H1g15191 | 1:30,109,637-30,110,248 | - | C2H1g00808 | - | - | - | - | Detail |
| C1H1g16633 | 1:30,118,323-30,118,856 | + | - | CX1g006863 | - | - | - | Detail |
| C1H1g08851 | 1:30,124,810-30,125,520 | + | C2H1g04740 | CX1g004754 | LOC_Os01g58420 | Os01g0797600 | ERF3, AP37, OsAP37, OsERF3, OsERF#075, OsERF075, OsERF75, ERF75, AP2/EREBP#004, AP2/EREBP4, OsBIERF2, BIERF2 | Detail |
| C1H1g04740 | 1:30,146,507-30,150,478 | + | C2H1g19057 | CX1g002330 | LOC_Os01g58470 | Os01g0798500 | OsY3IP1 | Detail |
| C1H1g24753 | 1:30,154,872-30,157,273 | - | C2H1g16159 | CX1g001040 | LOC_Os01g58500 | Os01g0798800 | - | Detail |
| C1H1g14458 | 1:30,157,504-30,158,697 | + | C2H1g05286 | CX1g005010 | LOC_Os01g58510 | Os01g0798900 | - | Detail |
| C1H1g21828 | 1:30,158,951-30,160,834 | - | C2H1g30085 | CX1g006206 | LOC_Os01g58520 | Os01g0799000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026717 | 3:16,075,758-16,076,510 | + | - | - | LOC_Os03g30920 | Os03g0423000 | - | Detail |
| CX3g027808 | 3:16,079,662-16,082,309 | - | C1H3g21142 | C2H3g09391 | LOC_Os03g30934 | Os03g0423200 | - | Detail |
| CX3g030134 | 3:16,086,844-16,088,184 | - | C1H3g28137 | C2H3g11099 | LOC_Os03g30950 | Os03g0423300 | - | Detail |
| CX3g030906 | 3:16,123,721-16,131,013 | + | C1H3g02815 | C2H3g06341 | LOC_Os03g31000 | Os03g0424000 | - | Detail |
| CX3g026037 | 3:16,131,446-16,131,622 | - | - | - | - | - | - | Detail |
| CX3g027986 | 3:16,132,741-16,137,297 | + | C1H3g12825 | C2H3g24636 | LOC_Os03g31010 | Os03g0423800 | - | Detail |
| CX3g028309 | 3:16,140,997-16,147,236 | - | C1H3g17862 | C2H3g06341 | LOC_Os03g31044 | Os03g0424000 | - | Detail |
| CX3g027805 | 3:16,151,648-16,152,058 | + | - | C2H12g13771 | - | - | - | Detail |
| CX3g031337 | 3:16,157,048-16,157,329 | + | - | - | - | - | - | Detail |
| CX3g026600 | 3:16,162,650-16,162,829 | - | - | - | - | - | - | Detail |
| CX3g030936 | 3:16,190,796-16,191,560 | - | C1H3g17862 | C2H3g06341 | LOC_Os03g31070 | Os03g0424200 | - | Detail |
| CX3g028435 | 3:16,206,373-16,209,511 | - | C1H3g27057 | C2H3g24777 | LOC_Os03g31110 | Os03g0424600 | - | Detail |
| CX3g026843 | 3:16,227,015-16,229,443 | + | C1H3g06288 | C2H3g02070 | LOC_Os03g31150 | Os03g0425000 | - | Detail |
| CX3g026358 | 3:16,231,204-16,233,926 | - | C1H3g23569 | C2H3g13373 | LOC_Os03g31170 | Os03g0425200 | - | Detail |
| CX3g025115 | 3:16,241,848-16,245,743 | + | C1H3g07104 | C2H3g29562 | LOC_Os03g31180 | Os03g0425300 | - | Detail |
| CX3g028933 | 3:16,246,194-16,246,374 | - | - | - | - | - | - | Detail |
| CX3g030946 | 3:16,251,679-16,253,549 | + | C1H3g07332 | C2H3g24938 | LOC_Os03g31210 | Os03g0425600 | - | Detail |
| CX3g027469 | 3:16,257,676-16,257,825 | - | - | - | LOC_Os12g33650 | Os11g0476333 | - | Detail |
| CX3g025387 | 3:16,265,938-16,268,947 | + | C1H3g20426 | C2H3g12524 | LOC_Os03g31230 | Os03g0425800 | - | Detail |
| CX3g029911 | 3:16,270,916-16,271,326 | - | - | - | - | Os03g0642300 | - | Detail |