| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g01886 | 6:18,205,994-18,208,359 | - | C1H6g25462 | CX6g045454 | LOC_Os06g35730 | Os06g0550000 | - | Detail |
| C2H6g10555 | 6:18,231,406-18,236,259 | - | C1H6g07327 | CX6g044667 | LOC_Os06g35814 | Os06g0551400 | OsRab11, ric2 | Detail |
| C2H6g03448 | 6:18,242,495-18,243,079 | + | C1H6g25938 | CX6g045817 | LOC_Os06g35830 | Os06g0551500 | - | Detail |
| C2H6g21675 | 6:18,318,449-18,318,803 | - | C1H6g02183 | CX6g041627 | LOC_Os06g35890 | - | - | Detail |
| C2H6g02875 | 6:18,320,398-18,322,987 | + | C1H6g30465 | CX6g043086 | LOC_Os06g35900 | Os06g0552300 | - | Detail |
| C2H6g19580 | 6:18,325,579-18,330,710 | - | C1H6g29774 | CX6g043043 | LOC_Os06g35910 | Os06g0552400 | - | Detail |
| C2H6g00486 | 6:18,340,606-18,341,785 | + | C1H6g12612 | CX6g042888 | LOC_Os06g35930 | Os06g0552700 | - | Detail |
| C2H6g07179 | 6:18,354,723-18,356,888 | - | C1H6g30558 | CX6g042912 | LOC_Os06g35940 | Os06g0552900 | OsFTL12 | Detail |
| C2H6g23400 | 6:18,380,123-18,382,513 | - | C1H6g12386 | CX6g045232 | LOC_Os06g35960 | Os06g0553100 | - | Detail |
| C2H6g02377 | 6:18,411,415-18,412,430 | - | C1H6g10321 | CX6g041276 | LOC_Os06g35970 | Os06g0553200 | - | Detail |
| C2H6g21266 | 6:18,420,897-18,421,940 | + | - | - | - | - | - | Detail |
| C2H6g25179 | 6:18,487,032-18,487,766 | - | C1H6g22773 | CX6g045888 | LOC_Os06g36010 | Os06g0553800 | - | Detail |
| C2H6g11618 | 6:18,496,301-18,497,216 | - | C1H6g14473 | - | - | Os06g0554200 | - | Detail |
| C2H6g26819 | 6:18,498,727-18,499,437 | - | C1H6g10481 | CX6g041858 | LOC_Os06g36040 | Os06g0554200 | - | Detail |
| C2H6g09581 | 6:18,536,633-18,545,747 | + | C1H6g30409 | CX6g044312 | LOC_Os06g36080 | Os06g0554700 | - | Detail |
| C2H6g20811 | 6:18,546,269-18,559,370 | - | C1H6g12887 | CX6g044731 | LOC_Os06g36090 | Os06g0554800 | - | Detail |
| C2H6g19558 | 6:18,573,898-18,577,192 | + | C1H6g18940 | CX6g045470 | LOC_Os06g36160 | Os06g0555400 | - | Detail |
| C2H6g01553 | 6:18,577,998-18,581,310 | - | C1H6g27356 | CX6g041699 | LOC_Os06g36170 | Os06g0555500 | - | Detail |
| C2H6g08197 | 6:18,592,381-18,595,277 | - | C1H6g25734 | CX4g032561 | - | Os04g0646000 | - | Detail |
| C2H6g02285 | 6:18,596,218-18,597,661 | - | C1H6g05986 | CX6g041977 | LOC_Os01g63890 | Os04g0646100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026824 | 3:15,435,031-15,437,838 | + | C1H3g13446 | C2H3g28547 | LOC_Os03g29810 | Os03g0411500 | VYL, OsClpP6, ClpP6, CLP6 | Detail |
| CX3g028485 | 3:15,439,239-15,441,064 | + | C1H3g17384 | C2H3g05086 | LOC_Os03g29830 | Os03g0411600 | - | Detail |
| CX3g026254 | 3:15,447,964-15,451,988 | - | C1H3g16278 | C2H3g03300 | LOC_Os03g29850 | Os03g0411800 | - | Detail |
| CX3g025249 | 3:15,486,635-15,491,017 | + | C1H3g01152 | C2H3g18598 | LOC_Os03g29910 | Os03g0412200 | - | Detail |
| CX3g027118 | 3:15,497,323-15,498,193 | + | C1H3g29513 | C2H3g25598 | LOC_Os03g29920 | Os03g0412300 | - | Detail |
| CX3g026464 | 3:15,503,089-15,503,973 | - | C1H3g14020 | C2H3g13302 | LOC_Os03g29930 | Os03g0412400 | - | Detail |
| CX3g027848 | 3:15,507,527-15,507,883 | - | - | C2H12g28081 | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX3g026817 | 3:15,522,966-15,526,393 | + | C1H3g23937 | C2H3g28011 | LOC_Os03g29950 | Os03g0412800 | - | Detail |
| CX3g030482 | 3:15,544,040-15,550,026 | + | C1H3g13193 | C2H3g06222 | LOC_Os03g29960 | Os03g0412900 | - | Detail |
| CX3g027945 | 3:15,551,274-15,551,981 | - | - | - | - | - | - | Detail |
| CX3g029713 | 3:15,561,408-15,564,398 | + | C1H3g10486 | C2H3g21811 | LOC_Os03g29980 | Os03g0413100 | - | Detail |
| CX3g028025 | 3:15,564,931-15,565,485 | + | - | - | - | - | - | Detail |
| CX3g028183 | 3:15,574,170-15,580,479 | - | C1H3g17935 | C2H3g29744 | LOC_Os03g30000 | Os03g0413400 | - | Detail |
| CX3g027439 | 3:15,599,950-15,600,198 | + | - | - | - | - | - | Detail |
| CX3g030098 | 3:15,611,210-15,611,461 | + | - | - | - | - | - | Detail |
| CX3g030572 | 3:15,612,626-15,613,711 | - | - | - | LOC_Os03g30060 | Os03g0414100 | - | Detail |
| CX3g027342 | 3:15,630,299-15,631,328 | - | C1H3g00999 | - | LOC_Os03g30092 | Os03g0414400 | OsHCF222 | Detail |
| CX3g027205 | 3:15,633,290-15,633,532 | + | - | - | - | - | - | Detail |
| CX3g026035 | 3:15,662,310-15,663,101 | + | C1H3g09941 | C2H3g13977 | LOC_Os03g30120 | Os03g0414900 | - | Detail |
| CX3g029525 | 3:15,668,677-15,668,874 | + | - | - | - | - | - | Detail |